Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g00352 ATGCAACTTTTCACATCATTGCCAGCTTTTTATTCTCAGCTCCTTCTTTCACTTCTCTTATCTTCTTTGTTTATTGTGTATCTTCTCCTCCAATGGCTACACCCCAAATGCAAACGCTTGCCCCCTGGTTCCATGGGTTGGCCCTTCCTGGGAGAGACCCTCAAGCTCTACACTGAAAACCCAAATACCTTTTTCTCTGACAGGCAGAAAAGATACGGAGATATCTTCAAGACTCGCATTCTGGGTTGTCCTTGTGTAATGATTTCAAGCCCAGAGGCAACAAGAACAGTGCTGGTGACTCAAGCACATCTGTTCAAACCAACATACCCAGCAAGCAAAGAAAAGATGATAGGTCCAGAGGCTGTTTTCTTTCAGCAGGGTGACTATCACTCCATGCTCAGGAAATTGGTTCAGGCCACTTTTATGCCCTCTGCTATTAAAAAATCAGTCTTGAAGGTTGAGCAAATTGTCCTTAAACTTCTTCCAACTTGGGCCAACACAACCATTAATGCCTTACAAGAGATGAAGAGGTATGCTTTTGAGGTAGCTGCCATTTCAGCCTTTGGTGAAATGATGGAGGTAGAAATGGAAGAAATCAAAAACCTGTATCGGTGCTTGGAGAATGGCTACAATTCATTTCCTTTATATGTTCCTGGAACTTCATATTGGAGATCGATGAAGGCAAGGAAGCTTCTGAATGAAACTATAAGGAGGATAATACATAAAAGAAGGGAAAGCAATAACTATGGAGGAGGGTTGTTGGGAGTTTTGTTGCGAGCTACAGGTCACAAAACAAACGAATTGCAACTAACTAATTCTCAGATTGCTGATAACCTCATTGGCGTGATCTTTGCTGCACATGATACCACAGCAAGTGTTCTAACATGGGTTCTAAAGTACTTGCATGACAATGTTAATCTCTTGGAAGCTGTCACGGAAGAGCATGAAGGAATTAAAAGCAAACTAGCTAAAGAAAATCGCAGGCTTACATGGGAAGATACTAAGCAGATGCCCCTCTCTGGCCGGGTTATCCAAGAAACTCTGAGAAGTGCAAGCATACTGTCATTTACATTCAGAGAAGCTGTGCAAGATGTTGAGCTCGAAGGTTACACCATTCCGAAAGGTTGGAAGGTCCTTCCCCTCTTCAGAAGCATTCATCACTGTGCTGATTTCTTCCCTCAACCAGACACATTTGACCCTTCGAGATTCGAGGTGCCACCGAGACCAAACACATATATGCCGTTTGGAAATGGAGTCCACTCTTGTCCAGGCAGTGAGCTGGCTAAGCTTGAGGTGCTCGTCCTTCTCCACCACCTTACCGTTTCTTACAGGTGGCAAGTTCAGGGAAATGAAGATGGAATACAGTATGGTCCTTTCCCTGTGCCCAAACATGGACTGCCAATCAAGATAACCCCAAAGAACAAATTACTTACCTGA 1437 0.437 MQLFTSLPAFYSQLLLSLLLSSLFIVYLLLQWLHPKCKRLPPGSMGWPFLGETLKLYTENPNTFFSDRQKRYGDIFKTRILGCPCVMISSPEATRTVLVTQAHLFKPTYPASKEKMIGPEAVFFQQGDYHSMLRKLVQATFMPSAIKKSVLKVEQIVLKLLPTWANTTINALQEMKRYAFEVAAISAFGEMMEVEMEEIKNLYRCLENGYNSFPLYVPGTSYWRSMKARKLLNETIRRIIHKRRESNNYGGGLLGVLLRATGHKTNELQLTNSQIADNLIGVIFAAHDTTASVLTWVLKYLHDNVNLLEAVTEEHEGIKSKLAKENRRLTWEDTKQMPLSGRVIQETLRSASILSFTFREAVQDVELEGYTIPKGWKVLPLFRSIHHCADFFPQPDTFDPSRFEVPPRPNTYMPFGNGVHSCPGSELAKLEVLVLLHHLTVSYRWQVQGNEDGIQYGPFPVPKHGLPIKITPKNKLLT* 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g00352 478 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 415 424 IPR017972 GO:0005506|GO:0016705
Rops3g00352 478 PRINTS P450 superfamily signature 413 422 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops3g00352 478 PRINTS P450 superfamily signature 422 433 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops3g00352 478 PRINTS P450 superfamily signature 285 302 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops3g00352 478 PRINTS P450 superfamily signature 342 353 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops3g00352 478 PANTHER CYTOCHROME P450 26 39 462 - -
Rops3g00352 478 Coils Coil 308 328 - -
Rops3g00352 478 Gene3D Cytochrome P450 34 473 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops3g00352 478 PRINTS E-class P450 group I signature 341 359 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops3g00352 478 PRINTS E-class P450 group I signature 294 320 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops3g00352 478 PRINTS E-class P450 group I signature 412 422 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops3g00352 478 PRINTS E-class P450 group I signature 274 291 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops3g00352 478 PRINTS E-class P450 group I signature 422 445 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops3g00352 478 PRINTS E-class P450 group I signature 69 88 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops3g00352 478 PRINTS E-class P450 group I signature 381 405 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops3g00352 478 SUPERFAMILY Cytochrome P450 34 472 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops3g00352 478 FunFam Abscisic acid 8 31 472 - -
Rops3g00352 478 Pfam Cytochrome P450 41 451 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g00352 Rops-Chr3 4369308 4374272 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g00352 14 467 Cytochrome P450 AT3G19270 56.140 0.0 543
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g00352 K09843 - gmx:100782541 745.732