Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g00317 ATGAACCAAAGGAAGAGAATCATATGGAGAAAGACTCAAGAAAATGGTTGCAGCATAAGGGCAAAAGCAGAAAAGGGTCAATTTGTTGTGTACAGCATGGATAAGAAAAGATTTGTGCTTCCTTTGGAGTATTTGAAAAACAATATCTTCAGAGAACTATTCAAGTTGGCAGAAGAAGAGTTTGGTTTATCTAGCAATGTGCCCCTTACGTTGCCTTGTGATGCCACAGTAATAAAGTATGTGATTACGTTGATCCAGCGAAACGTGGCCAAGGATCTTGAGGAAGCTGTGTTAATGTCCATAACTAGTGGTCGATGCCAATCTTATTTGGATCTTCATCATGAACCAACCAATCAACATTTGCTCTGTAGCTTCTGA 378 0.3942 MNQRKRIIWRKTQENGCSIRAKAEKGQFVVYSMDKKRFVLPLEYLKNNIFRELFKLAEEEFGLSSNVPLTLPCDATVIKYVITLIQRNVAKDLEEAVLMSITSGRCQSYLDLHHEPTNQHLLCSF* 126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g00317 125 PANTHER AUXIN-RESPONSIVE FAMILY PROTEIN 3 119 IPR003676 GO:0009733
Rops3g00317 125 Pfam Auxin responsive protein 3 85 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g00317 Rops-Chr3 4020647 4021024 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g00317 25 93 Calmodulin-binding Proteins AT5G20810 38.571 4.43e-11 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g00317 - - gmx:100803097 182.956
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops3g00317 3 4020647 4021024 Rops3g00317 3 4020647 4021024 ECH