Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g00316 ATGGAATACTTGGCTAACAAAATCGATTTGGACTTTGGTGAAGCTGAGAACAAGAAGAAGCTTGATGTTACCGAAAATTATAGGATGGATCAGTTACAAAGTTGTTTCTATAGTGTTTATCTATATGATATTGCAATTATTCAGACAAATGTCACCTCAGCCAGATGGCTGCTAGAAGGGCCTATAGCTGCTGGGCCCAAAATGTTAATTGCAAAAAGGCTTATTGAAATGGCAAGAAAGTGGCAGAAAATGGCAGCTGGGAAACGCAAGAGAATTTCATACCCAAGAAACGAAGTGGATATGCATTCTTCAGCAGCTAACAAAGGCCACTTCGTTGTTTACACCATCGATCATAAGCGATTTGTGGTTCCCCTCAAATATCTTAGCACTAATGTTTTCAGGGAGCTTCTAAAATGGTCAGAGGAAGAGTTTGGATTACCATCCAATGGACCTATTATGTTACCATGTGATAGTGTGTTCTTGGAATATGTAATCTCGTTGATTCAAGAAAGCATGCCCGAAGATGCGGAAAAGGCTTTGATCACTTTCATGACTGCATGTCACAATGAGGCATCAGCTTCTCATGATCTTAGGCAAAGTAACGAACAAATAATTATCTATGGCTTTTGA 630 0.3937 MEYLANKIDLDFGEAENKKKLDVTENYRMDQLQSCFYSVYLYDIAIIQTNVTSARWLLEGPIAAGPKMLIAKRLIEMARKWQKMAAGKRKRISYPRNEVDMHSSAANKGHFVVYTIDHKRFVVPLKYLSTNVFRELLKWSEEEFGLPSNGPIMLPCDSVFLEYVISLIQESMPEDAEKALITFMTACHNEASASHDLRQSNEQIIIYGF* 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g00316 209 PANTHER AUXIN-RESPONSIVE FAMILY PROTEIN 68 196 IPR003676 GO:0009733
Rops3g00316 209 Pfam Auxin responsive protein 79 168 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g00316 Rops-Chr3 4012329 4016528 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g00316 73 168 Calmodulin-binding Proteins AT4G34750 32.990 1.18e-10 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g00316 - - gmx:100802572 210.69