Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g00312 ATGGTCAGGGAGATCAATTCGGTTCAAGAGGTCCGCCTAAGCGTTAGGACGCTCCAGGCTGGCTATGGATCAGAAAGTGAAGCAGATGAAGAAGCAGCAACAGTTACTTTGTCCAATGATCTTGGTAATGAGATGCCTGCTTCTGTTGACAATGGGAATTATTTCCTCACTGGTCACATAATATCCACTACAATTGAAGGAAAATATGGGGTACCCAAACAGACTATAAGTTACATAGAAAAACGCGTTGTGGGGACTGGGTCATCTGGAATTGTTTTCCAGGCAAAATGCTTGGAAACTGGGGAGGCAGTGGCTATTAAGAAGGTTTTACAGGACAGAAGATATAAAAATCGTGAACTACTGTTAATGCGCATGATGGATCATCCAAATGTGATCTCTCTGAAGCATTGTTTCTATTCCACTACAAGTACAGATGAAATTTTTCTTAATTTGGTGATGGAATATGTTCCAGAGTCTACGTATCGAGCCTTGAAGTGCTATAGCAATGCTAATCAAAGAATGCCACTTATCTATGTAAAACTTTATATGTACCAGGTATGCCTCGGACTTTCTGGGGGCTGGCTTATATCCACATTGTACCTGGAGTTTGCCAGATATTTGAAGCCTCAAAACATACTGGTTGACCCTCTTACACACCAGGTTAAGATATGTGGTTTTGGAAGTGCAAAAGTGCTGGTCAAAGGTGAAGCTAATATATCATATATATGTTCGCGTTTCAATCAGGCTCCAAAACTTATATTTGGTGCCGCTGAGTATACTACTTCAATTGATATTTGGTCAGCTGGCTGTGTCCTTGCTGAACTGCTTTTGGGCCAGCCATTATTTCCTGGTGAAAATGCAGTGGACCAGCTTGTAGAGATAATCAAGGTTCTTGGCACACCCATTCGGGAGGAAGTCCGCTGTATGAATCCAAACTACAATGATTTCAGGTTTCCACAGGTTAAAGCACACCCGTGGCACAAGATATTCCATAAAAAAATGCCTCCAGAAGCAATTGATCTAGCTTCCCGGCTTCTGCAGTACTCCCCAAGTCTCCGATGTACTGCGCTAGAAGCATGTGCACACCCATTCTTTGATGAATTCCGTGAACCAAATGCTCGTTTGCCAAATGGTCATCCATTTCCACCTCTATTCAACTTTAAACAAGAGTTGTCTGGAGCATCTCCAGAGCTTGATAATAAGTTGATACCTGACCACGTGAAGCGGAAGATTGGGCTACAATATGCCCATTTGGCAGGAAAATGA 1266 0.4258 MVREINSVQEVRLSVRTLQAGYGSESEADEEAATVTLSNDLGNEMPASVDNGNYFLTGHIISTTIEGKYGVPKQTISYIEKRVVGTGSSGIVFQAKCLETGEAVAIKKVLQDRRYKNRELLLMRMMDHPNVISLKHCFYSTTSTDEIFLNLVMEYVPESTYRALKCYSNANQRMPLIYVKLYMYQVCLGLSGGWLISTLYLEFARYLKPQNILVDPLTHQVKICGFGSAKVLVKGEANISYICSRFNQAPKLIFGAAEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPIREEVRCMNPNYNDFRFPQVKAHPWHKIFHKKMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDEFREPNARLPNGHPFPPLFNFKQELSGASPELDNKLIPDHVKRKIGLQYAHLAGK* 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g00312 421 Gene3D Transferase(Phosphotransferase) domain 1 159 408 - -
Rops3g00312 421 CDD STKc_GSK3 73 367 IPR039192 -
Rops3g00312 421 Pfam Protein kinase domain 78 365 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops3g00312 421 FunFam Glycogen synthase kinase-3 beta 62 157 - -
Rops3g00312 421 SUPERFAMILY Protein kinase-like (PK-like) 77 389 IPR011009 -
Rops3g00312 421 FunFam Shaggy-related protein kinase kappa 158 408 - -
Rops3g00312 421 ProSitePatterns Protein kinases ATP-binding region signature. 84 108 IPR017441 GO:0005524
Rops3g00312 421 PANTHER GLYCOGEN SYNTHASE KINASE-3 ALPHA 44 409 - -
Rops3g00312 421 Gene3D Phosphorylase Kinase; domain 1 64 157 - -
Rops3g00312 421 ProSiteProfiles Protein kinase domain profile. 78 365 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g00312 Rops-Chr3 3933029 3947146 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g00312 53 381 MAP Kinase Gene Family AT3G59790 31.805 4.76e-46 161
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_GSK Rops3g00312 Pkinase 7.7e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g00312 K14502 - gmx:100779909 648.662