Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g00285 ATGGGTATATATGAAGCCATAAATGTGGTGTTCACCAAAATCAAAAACCTTGACCCAGAAAACGCCTCCAAGATCATTGGCTACATTTTTGGCAATCTCCAAGAAACTGAAATAGTACGCCTAGCTTCTAGCCCTGATCATGTTCTTCACAGTCTTGTTCTCAAGACAGAATGGAACTCTATTGATGACCTTATAAATAAACAACTATTGGGTGACCTTTCCTTCCTCGATGAGTCACCGAAACATAAAGAGAATTTGGAAGATTGGATCGGTGCAGGACTTGAATGGGGTCACAAGGCTCACAGTAAGCATTCTATTGGCAATAATGACAATGACCCTTTCCATGGAAGGATCTACTCTACCAGTAATATGCACCTTGGGTCTGAAGAAAGAGGATATAAGGGCTGCCTCTACTTTGATAGATGGTACTGCAAAAATGGCAGCAACTGCAAGTTTGTGCATAGTACATTGACTGATGCAGTGGATGCATTGGTTGGTCCTCCAAGTAAGTTTGATGAGGAGATTATGCAACATCAAAAATCAGTGGCTACTTCAAACCTCAGGGTTGAACCTTCACTATCTTCCTACGAGAAGTATTTTGACTTTTTGATGCAGCTATATAAAGATGCAAAGAGAGGAGCTGCAGTGACGATGGGAGATGAATTTCACAAGTTTAGCTGGTGCAGTCCGGAAAGGAATGACTTTATGAACAATGTTTCGGCTGAAAAGCCTAACTCTCCTTCCAGACAGATTTTTTTAACGTTTCCTGCTGAAAGCACATTTAAAGAGGAAGATGTTTTAGAATACTTCAGGAGACAACAGCATCAACAACAGCAATCAGAGAGGGGAAAAAGTTCATCACGTTTGAGCCCCTGTGGGCTTGACTCCGAAGAACCTTATGATTTCCATCTTGGAGCAAGAAGGTTGCATAATCCACATGAGATCTTGTTGAGAAGAAAATTGGAGGAGCAGGCTGAGTTGCAGCAAGCCGTTGAACTTAATAAAAGAAGGCTGATGAATTTGCAGCTTCCAGACTTCAAGAATGATCACATTCGCTCTGTTGGTGCTTCTTTGCCCTTACCACAAATTCATAGTAATATTAGCAATCCAGGTCTTTCTTCTGATAGCATTAAAGGAAATATTACAGGCTTCAGTGACAACCTCATTTCTACCATTTCATCAGCTGCTTTTGCTGCTCAGCCACAGCAAGAAGTTGATCCAGCTTGTATTCATGATACTGGGAATAGGAAGGATAGCACAGTGGCAGAAATCACAAATATTTGGGATAGTGTGGAGCATGCCCTTCCTGATAGCCTCTTTTCTTCTCCATCAATGGCTGGTGGAGATAATCTATCTGACTTCTCTACATTGGCAGAGGTCAATGAGAGTGACATATTCTCCACAAGCTCAGTATCTTCTTACGAGTTTGTACCGGAAAACACTTCTAGTGACATGGCTTCTCATTAG 1467 0.4158 MGIYEAINVVFTKIKNLDPENASKIIGYIFGNLQETEIVRLASSPDHVLHSLVLKTEWNSIDDLINKQLLGDLSFLDESPKHKENLEDWIGAGLEWGHKAHSKHSIGNNDNDPFHGRIYSTSNMHLGSEERGYKGCLYFDRWYCKNGSNCKFVHSTLTDAVDALVGPPSKFDEEIMQHQKSVATSNLRVEPSLSSYEKYFDFLMQLYKDAKRGAAVTMGDEFHKFSWCSPERNDFMNNVSAEKPNSPSRQIFLTFPAESTFKEEDVLEYFRRQQHQQQQSERGKSSSRLSPCGLDSEEPYDFHLGARRLHNPHEILLRRKLEEQAELQQAVELNKRRLMNLQLPDFKNDHIRSVGASLPLPQIHSNISNPGLSSDSIKGNITGFSDNLISTISSAAFAAQPQQEVDPACIHDTGNRKDSTVAEITNIWDSVEHALPDSLFSSPSMAGGDNLSDFSTLAEVNESDIFSTSSVSSYEFVPENTSSDMASH* 489
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Rops3g00285 488 PANTHER RNA-BINDING (RRM/RBD/RNP MOTIFS) 275 445 - -
Rops3g00285 488 MobiDBLite consensus disorder prediction 272 292 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Rops3g00285 Rops-Chr3 3499861 3508551 Tandem
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Rops3g00285 None None None
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g00285 - - aprc:113869264 362.459