LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Rops3g00285	ATGGGTATATATGAAGCCATAAATGTGGTGTTCACCAAAATCAAAAACCTTGACCCAGAAAACGCCTCCAAGATCATTGGCTACATTTTTGGCAATCTCCAAGAAACTGAAATAGTACGCCTAGCTTCTAGCCCTGATCATGTTCTTCACAGTCTTGTTCTCAAGACAGAATGGAACTCTATTGATGACCTTATAAATAAACAACTATTGGGTGACCTTTCCTTCCTCGATGAGTCACCGAAACATAAAGAGAATTTGGAAGATTGGATCGGTGCAGGACTTGAATGGGGTCACAAGGCTCACAGTAAGCATTCTATTGGCAATAATGACAATGACCCTTTCCATGGAAGGATCTACTCTACCAGTAATATGCACCTTGGGTCTGAAGAAAGAGGATATAAGGGCTGCCTCTACTTTGATAGATGGTACTGCAAAAATGGCAGCAACTGCAAGTTTGTGCATAGTACATTGACTGATGCAGTGGATGCATTGGTTGGTCCTCCAAGTAAGTTTGATGAGGAGATTATGCAACATCAAAAATCAGTGGCTACTTCAAACCTCAGGGTTGAACCTTCACTATCTTCCTACGAGAAGTATTTTGACTTTTTGATGCAGCTATATAAAGATGCAAAGAGAGGAGCTGCAGTGACGATGGGAGATGAATTTCACAAGTTTAGCTGGTGCAGTCCGGAAAGGAATGACTTTATGAACAATGTTTCGGCTGAAAAGCCTAACTCTCCTTCCAGACAGATTTTTTTAACGTTTCCTGCTGAAAGCACATTTAAAGAGGAAGATGTTTTAGAATACTTCAGGAGACAACAGCATCAACAACAGCAATCAGAGAGGGGAAAAAGTTCATCACGTTTGAGCCCCTGTGGGCTTGACTCCGAAGAACCTTATGATTTCCATCTTGGAGCAAGAAGGTTGCATAATCCACATGAGATCTTGTTGAGAAGAAAATTGGAGGAGCAGGCTGAGTTGCAGCAAGCCGTTGAACTTAATAAAAGAAGGCTGATGAATTTGCAGCTTCCAGACTTCAAGAATGATCACATTCGCTCTGTTGGTGCTTCTTTGCCCTTACCACAAATTCATAGTAATATTAGCAATCCAGGTCTTTCTTCTGATAGCATTAAAGGAAATATTACAGGCTTCAGTGACAACCTCATTTCTACCATTTCATCAGCTGCTTTTGCTGCTCAGCCACAGCAAGAAGTTGATCCAGCTTGTATTCATGATACTGGGAATAGGAAGGATAGCACAGTGGCAGAAATCACAAATATTTGGGATAGTGTGGAGCATGCCCTTCCTGATAGCCTCTTTTCTTCTCCATCAATGGCTGGTGGAGATAATCTATCTGACTTCTCTACATTGGCAGAGGTCAATGAGAGTGACATATTCTCCACAAGCTCAGTATCTTCTTACGAGTTTGTACCGGAAAACACTTCTAGTGACATGGCTTCTCATTAG	1467	0.4158	MGIYEAINVVFTKIKNLDPENASKIIGYIFGNLQETEIVRLASSPDHVLHSLVLKTEWNSIDDLINKQLLGDLSFLDESPKHKENLEDWIGAGLEWGHKAHSKHSIGNNDNDPFHGRIYSTSNMHLGSEERGYKGCLYFDRWYCKNGSNCKFVHSTLTDAVDALVGPPSKFDEEIMQHQKSVATSNLRVEPSLSSYEKYFDFLMQLYKDAKRGAAVTMGDEFHKFSWCSPERNDFMNNVSAEKPNSPSRQIFLTFPAESTFKEEDVLEYFRRQQHQQQQSERGKSSSRLSPCGLDSEEPYDFHLGARRLHNPHEILLRRKLEEQAELQQAVELNKRRLMNLQLPDFKNDHIRSVGASLPLPQIHSNISNPGLSSDSIKGNITGFSDNLISTISSAAFAAQPQQEVDPACIHDTGNRKDSTVAEITNIWDSVEHALPDSLFSSPSMAGGDNLSDFSTLAEVNESDIFSTSSVSSYEFVPENTSSDMASH*	489

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Rops3g00285	488	PANTHER	RNA-BINDING (RRM/RBD/RNP MOTIFS)	275	445	-	-
	Rops3g00285	488	MobiDBLite	consensus disorder prediction	272	292	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Rops3g00285	Rops-Chr3	3499861	3508551	Tandem

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	C3H	Rops3g00285		None	None	None

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Rops3g00285	-		-	aprc:113869264	362.459