Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g00240 ATGGCTTACATGTGTGCTGACAGTGGGAACCTTATGGCTATTGCTCAACAAGTGATCAAACAAAAACAGCAACAAGAACAAGAACAGCAACAGCAACAGCAACAACAACATCACATGTTGGGTGGAATCAACCCTCTGTCTCTTCATCATCCATGGAACATTCACAACACTCCACCACACTTGGGCTTTCCACTTCCACTCCCTACCAATGATTTCACCGACCCTTTTCAAGTCGGGTCGGGTCCTGAGAATCCGGATCCTGGATTCCAGTTTCCTCCCCTCGACCCTCATTCCGCCGCCTTTAGGTTCTCCGATTTCGACTCCGATGACTGGATGGACACCTTAATGGCCGGCGCCGACTCAACTGAAACCCCTGATTTCCCTCTTAACCCGTTTTCCTCATGCACGACCCGACTCTCCCCTCCATCGGATCTCAACCGGGTCATCTTCACTTCCGAGTCTCAGTCTCAGACCAGCACCGCCACCGTCCCTCTTCAACCCCCCACTTTCCCCAAAGACCCTGCTCCTCCGGCGAAGGTCACTCTTAACCGAAACGACATCGGCGGCGCATCTGAAACGACGGCGTCGGTTCATCCGCTTCTGAAAGCGTTAACGGAGTGTGCCCGGTTAGCTGAAACCGAACCGGATCAAGCAGCTGAATCTCTGACCCATCTAAGCAAATCAGTGTCACAGCATGGAAACCCTACTCAGAGGGTGGCCTTCTACTTCTCCCAAGGTCTAACAAACAAAATATCTGCAGAAAGAGAGAAAGTGAAAGTGAAAGATAAGAATTCGGTGGAGCCTACTATGACTACTACCACTACTTCAGAGGAGTTAACACTCTCTTACAAAGCTTTAAACGATGCTTGCCCTTATTCAAAGTTTGCTCATTTAACTGCTAATCAAGCTATACTTGAAGCTACAGAAGGAGCCAGTGAGATTCACATAGTTGACTTTGGGATTGTTCAAGGGATTCAATGGGCTGCACTGTTGCAAGCATTTGCTACGCGTTCTTCTGGGAAGCCTCAAAGGGTAAGAATTTCGGGGATACCTGCGATGGCTCTTGGAACTTCACCCGGTCCTTCTCTTTCTGCAACTGGGAATCGTCTTTCTGAGTTTGCAAAGCTTGTTGGGTTGAATTTCGAGTTTACACCTATTCTTAACCCTGTTCATCACCTCAACGAGTCTAGCTTTTGCATTCAACCAAACGAGGCCTTAGCTGTTAACTTCATGCTTCAGTTGTATAATCTTTTGGACGAGACAACAACTGCAGTGGAGACTGCACTTCGTTTAGCTAAATCTTTGAAGCCAAGAATTGTAACTCTTGGGGAGTATGAAGCAAGTTTGACACGTGTTGGCTTCCTAGACAGGTTCGACAATGCATTGAAGTATTTCTCAGCTTTGTTTGAGTCTTTGGAGCCAAATTTGCCCTCTGACTCCCCGGAGAGGTTTCAGGTGGAGAGTCTTCTTCTCGGCCGGCGGATTGCCAGCGTGATTGGGCCGGGAACTGTGAGGGAAAGGATGGAGGATAAAGAGCAGTGGAGGGTTCTGATGGAAAGTTGTGGTTTTGAATCAGTAAGTTTAAGCCATTATGCAATTAGTCAAGCTAAGATACTTTTGTGGAATTACAGTTACAGTCCTCTGTATTCACTTGTTGAATCTCAACCGGGGTTTTTGTCTTTGGCTTGGAAAGATGTCCCTCTATTGACTGTTTCTTCTTGGCGTTAA 1728 0.4734 MAYMCADSGNLMAIAQQVIKQKQQQEQEQQQQQQQQHHMLGGINPLSLHHPWNIHNTPPHLGFPLPLPTNDFTDPFQVGSGPENPDPGFQFPPLDPHSAAFRFSDFDSDDWMDTLMAGADSTETPDFPLNPFSSCTTRLSPPSDLNRVIFTSESQSQTSTATVPLQPPTFPKDPAPPAKVTLNRNDIGGASETTASVHPLLKALTECARLAETEPDQAAESLTHLSKSVSQHGNPTQRVAFYFSQGLTNKISAEREKVKVKDKNSVEPTMTTTTTSEELTLSYKALNDACPYSKFAHLTANQAILEATEGASEIHIVDFGIVQGIQWAALLQAFATRSSGKPQRVRISGIPAMALGTSPGPSLSATGNRLSEFAKLVGLNFEFTPILNPVHHLNESSFCIQPNEALAVNFMLQLYNLLDETTTAVETALRLAKSLKPRIVTLGEYEASLTRVGFLDRFDNALKYFSALFESLEPNLPSDSPERFQVESLLLGRRIASVIGPGTVRERMEDKEQWRVLMESCGFESVSLSHYAISQAKILLWNYSYSPLYSLVESQPGFLSLAWKDVPLLTVSSWR* 576
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g00240 575 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 161 570 IPR005202 -
Rops3g00240 575 Coils Coil 12 35 - -
Rops3g00240 575 MobiDBLite consensus disorder prediction 154 177 - -
Rops3g00240 575 ProSiteProfiles GRAS family profile. 191 575 IPR005202 -
Rops3g00240 575 Pfam GRAS domain family 201 575 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g00240 Rops-Chr3 3015133 3017598 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g00240 1 575 GRAS Transcription Factor Family AT5G66770 56.106 0.0 592
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Rops3g00240 GRAS 4.8e-109 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g00240 - - adu:107477343 733.021