Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g00228 ATGGTAAACCCAAAAGTGTCTAGTCGGCCAAAAATATGCTACAGGCCTATACAACCTTCTGACCTCAACGTTTTAGAGCATATTCATGTCAATCTATTTCCCATCAGGTATGAATCTACTTTTTTCCAAGATGTTGTAAATGGATGTGACATTGTGTCATGGGGAGCTGTGGACTCTAATCGGCCCGATGGCCAAAGTGATGAACTCATTGGATTTGTAACAGCACGTATTGTTCTTGCAAAAGAAAGCGAGATAGTGGATATGCTCGGATATGACTCATCCAAATCAGATCAAACTTTAGTTTACATTCTGACACTGGGAGTGGTGGAAGCATATAGAAATCTTGGGATAGCTTCTTCTCTGATTAGGGAGGTCATAAAATATGCTTTAAGTATTCCAACCTGCCGAGCTGTTTACTTGCATGTAATTTCATACAATAGTTCAGCCATCTATTTGTACAAGAAAATGTCTTTCAAGTGCGTAAGAAGGCTGCAGGGATTTTATTTAATCAATGGCCGACATTATGATTCATACTTATTCCTGTACTATGTAAATGGGGGACGATCTCCTTGCTCACCTCTAGAGCTTCTCACTGCAATAGTAGGCTACATTAGGAGTGGCTTTAAGTCGATGGCTGCAAGACTGTGCAAGAGTGAAGACAGGAAGGTCTCAAGGTGGGCAAAGTGTAAAGAAAGCCATTCTCTTGTATCAGTGACACATCACAAGAGAAACCCGGCAGTTGAATGTACTGGATACGAGTGTGTTTAA 768 0.4089 MVNPKVSSRPKICYRPIQPSDLNVLEHIHVNLFPIRYESTFFQDVVNGCDIVSWGAVDSNRPDGQSDELIGFVTARIVLAKESEIVDMLGYDSSKSDQTLVYILTLGVVEAYRNLGIASSLIREVIKYALSIPTCRAVYLHVISYNSSAIYLYKKMSFKCVRRLQGFYLINGRHYDSYLFLYYVNGGRSPCSPLELLTAIVGYIRSGFKSMAARLCKSEDRKVSRWAKCKESHSLVSVTHHKRNPAVECTGYECV* 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g00228 255 CDD NAT_SF 77 141 - -
Rops3g00228 255 Pfam Acetyltransferase (GNAT) family 60 158 IPR000182 GO:0016747
Rops3g00228 255 Gene3D - 4 187 - -
Rops3g00228 255 PANTHER N-ALPHA-ACETYLTRANSFERASE 60 3 243 IPR045141 GO:0004596
Rops3g00228 255 FunFam Histone acetyltransferase MCC1 isoform A 6 187 - -
Rops3g00228 255 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 12 185 IPR000182 GO:0016747
Rops3g00228 255 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 10 185 IPR016181 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g00228 Rops-Chr3 2885996 2891272 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Rops3g00228 Acetyltransf_1 2.2e-11 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g00228 K22767 - gmx:100812509 446.817