Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g00217 ATGGGAGGTGGAAGAAGTTTCAATGAAGGTGTTGTGGGAGAAAAGAAAGAAGAAAACAAGTGGCCTCCATGGCTGAAGCCACTTCTCAAGACAAGCTTTTTTGTTCAATGCAAAGTCCATGCAGATTCTCACAAGAGTGAATGCAACATGTATTGCCTGGATTGTATGAATGGAGCCCTTTGTTCTGCTTGTTTGGCTTCCCACAAAGAACACAGAACAATTCAGATAAGGAGGTCTTCATACCATGATGTGATAAGGGTGTCTGAGATACAGAAATTTCTGGACATAACAGGGGTCCAAACTTACATTATCAACAGTGCCAAGATTGTGTTCTTGAATGAAAGGCCTCAACCTAGGCCTGGAAAAGGGGTCACCAATACCTGCCAAGTTTGTGAGCGCAGCCTCCTTGATTCCTTCAGCTTCTGCTCTCTTGGTTGCAAGATTGTTGGAACCTCCAAGAAGGTCCGGAAGAATAAAATGTTAGGTGAGACAGATGGGTCTGATGGTGAAGGATCAATGAATGGCATTAGCAATGGAAGTGCCAGAAACAAAATCCATAGCTTTACACCTTCAACACCACCACCAACAGTGGTGAATTACAGAACAGCCAAGAGGAGGAAAGGAGTTCCACATAGAGCTCCAATGGGAGGAGGGATTATTATAGAATTCTAA 672 0.436 MGGGRSFNEGVVGEKKEENKWPPWLKPLLKTSFFVQCKVHADSHKSECNMYCLDCMNGALCSACLASHKEHRTIQIRRSSYHDVIRVSEIQKFLDITGVQTYIINSAKIVFLNERPQPRPGKGVTNTCQVCERSLLDSFSFCSLGCKIVGTSKKVRKNKMLGETDGSDGEGSMNGISNGSARNKIHSFTPSTPPPTVVNYRTAKRRKGVPHRAPMGGGIIIEF* 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g00217 223 CDD Bbox2 37 76 - -
Rops3g00217 223 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 15 215 - -
Rops3g00217 223 Pfam PLATZ transcription factor 77 148 IPR006734 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g00217 Rops-Chr3 2778752 2780940 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Rops3g00217 PLATZ 3.5e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g00217 - - gmx:100810757 397.512
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops3g00217 3 2778752 2780940 Rops1g02351 1 45851352 45853732 ECH
Rops3g00217 3 2778752 2780940 Rops3g00217 3 2778752 2780940 ECH