Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g00208 ATGATAATTCCAACATACATAGGGGAGTGTCAAGAATGTGAGAATTGCGTTTCTGGAAAAACCAATCTTTGCACGACATACCCTGTAAGATTGACTGGCCTATTGCCTGATAACACTTCAAGGATGTCCATCAAAGGACAGAGGCTATACCATTCTTTAAGTTGTGCTACATGGTCAGAGTACATGGTTATTGATGCCAACTACCTTCTCAAAGTTGATCCAAGCATGGATCAAGCCCATGCCAGTTTCATCTCATGTGGGTTTTCAACTGGTCTTGGAGCTGCTTGGAAGGAAGCCAAGGTTGAAAGTGGATCAAGTGTAGCATTTTTTGGTCTTGGGGCTGTTGGATTAGGGGCTGTAAGCGGAGCCAAGATGCAGGGAGCAACTAAGATAATTGGGATTGACAAAAACGAGCTGAAGAGAGAAAAAGGAGAAGCTTTTGGAATGACCCACTTTATAAATCCTGATGATTCTGTTAAATGTGCTTCAGAATTGGTGAAGGAACTGAGTGGTGGAATGGGTGTGGATTATTCCTTTGAGTGCACTGGAGTTCCCTCTTTGCTTACTGAATCCGTGGAAGCCACTAAAGTGGGGACAGGTAAAACTATCGCACTTGGTATAAGAGCTGAACCTATGGTATCGTTTGATCTTCTTGCCATCTTGTTTGGTAGAACATTGAAAGGTTCTATTTTTGGAGGGCTAAAAACCATATCGGACCTTTCCATCATGGCTAACAAATGTCAGAAAGAGGAATTCCCCCTTCAAGAACTATTCACCCATGAGGTCTCATTGGCAGACATAAACAAAGCATTTGAGCTGTTGAAACAACCCGATTGTGTGAAAGTTGTCATCAAGATGTGA 861 0.4251 MIIPTYIGECQECENCVSGKTNLCTTYPVRLTGLLPDNTSRMSIKGQRLYHSLSCATWSEYMVIDANYLLKVDPSMDQAHASFISCGFSTGLGAAWKEAKVESGSSVAFFGLGAVGLGAVSGAKMQGATKIIGIDKNELKREKGEAFGMTHFINPDDSVKCASELVKELSGGMGVDYSFECTGVPSLLTESVEATKVGTGKTIALGIRAEPMVSFDLLAILFGRTLKGSIFGGLKTISDLSIMANKCQKEEFPLQELFTHEVSLADINKAFELLKQPDCVKVVIKM* 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g00208 286 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 77 247 IPR036291 -
Rops3g00208 286 Gene3D - 2 281 - -
Rops3g00208 286 Pfam Zinc-binding dehydrogenase 114 235 IPR013149 -
Rops3g00208 286 FunFam S-(hydroxymethyl)glutathione dehydrogenase 91 229 - -
Rops3g00208 286 Gene3D - 91 229 - -
Rops3g00208 286 PANTHER ALCOHOL DEHYDROGENASE 2 278 - -
Rops3g00208 286 SUPERFAMILY GroES-like 2 102 IPR011032 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g00208 Rops-Chr3 2690400 2691636 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g00208 7 278 Monolignol Biosynthesis Gene Families AT2G21730 25.455 3.40e-07 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g00208 K00121 - gmx:100798341 476.863