Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g00200 ATGGCTGATAGTGTAGTTTCCTTTCTTTTACAAAACTTGTCCCAGTTGCTGGCAAACGAAGCCAAGTTGCTCTGTGGCGTGGAAGATAGAATAAGATCCCTCCACAACGAGCTAGAAATGATCAACGTGTACCTCAAAACCTCCGAGGGGAAGAAGAGCAAGAAGGAGATCGAACAAAAAGTTGCGAGTCAAATTAGAGATGTGTCCCACATGGCCGAGGATGTCATCGACACATTCCTCGCCAACGTCGCCATGCACAAGAGGAGAAGCGTGCTGGGGAGAATGATCCATGGCGTTGACCACGCAAAGTTGCTCCACGATGTAGCTGAGACAATAGACAAGATAAAAACCACTATCATCAAGATATGCGACAACAAGATCAAATATGATTTCCCAGAAAGTAGTGATCAGTCCACATCAGCAAGAGAAGAGGAGGAGAGGGCACAGTCACTGCACAAACGAAGAAGAAACGTGGAGGAGGAAGATGTAGTGAGGCTCGTCCATGACTCCAAGGCAATCATCAACCGGCTGGTGGAAGGGGATTCAAGTCGTAACATCGCTTCTATCATCGGTATGGGTGGATTGGGAAAGACTACCCTTGCCCGAAAGGTCTATAACAGCGAAGAGGTGAAGCGACACTTCAATTGCCGTGCATGGGTGTACGTGTCAAACGAGTGCAGAGCCAGGGAGCTTTTGCTTGGCCTTCTTCAAGATTTGATGCCAAAAGCTGAATATGAATGTAGAGGCAACAAGAAGGATAAGAAAAACAAGGAAACAGATAAGCCTCGAGACTTCTCAAGCTTGACTGAGGACGAGCTGAAGATAAAGGTGCGGGAATTCTTGAAAAGGAAAAGGTACTTGATGGTCCTCGATGACTTGTGGAGAAAGCAAGATTGGGATGAGATACAAGATGCTTTTCCTGATGAGAACAGAGGCAGCAGGATATTGATTACTAGTCGTTTGAAAGAGGTGGCCTTACATACCAGCCAAGATCCTCCCTACTACCTTCAATTTCTCAATGAAGAACAAAGCTGGGAGCTCTTCTTCAAAAAAGTGTTTAGGGGAGAAAAGTGCCCTTCCGACCTTGAGCCTTTAGGTAGGCAAATAGTTCAAGGTTGTCGTTGGTTGCCACTCTCAATCGTGGTATTGGCAGGGCTTCTCGCAAACAAGGAAAAGTCACACAAGGAATGGTCTAAAGTGGTGGGCCATGTCAACTGGTACCTGAGTCGAGACGAGACCCAAGTCAAGGATATAGTACTCAAACTCAGCTATGACAACTTGCCTAGAAGATTAAAGCCATGCTTTCTCTATCTTGGGATATTCCCTGAAGACTCTGAAATCTGTGTCAGACAATTGCTCCAACGATGGGTTGCAGAAGGATTTATACAAGAAATTGGGAGTAGAGATCCAGATGATGTTGCTGAAGACTACTTGTATGAGCTCATTGATCGTAGTTTGATCCAAGTAGCACGAGTGAAGACTTGTGGAAGTGTGAAAACATGTCGCATCCACGATCTTCTCCGAGATCTCTGCATATCTGAGAGCAAAGAGGATAAGGTTTTTGAAGTTTGCACGGATGTTAATGTCCTAATCCCAACAAAACCTCGCAGGCTATCCATCCATTGTAGCATGGCTCGCTACATTTCTTCAAGTAGTAATGACCATTCATGTGTTCGTTCTTTGTTCTGCTTTGACCCATGTTACTATGTTGCTCGTAGCGAGTGGAAACGGCTTTCCAAAAGCTTCAAATTGGTTCGGGTGTTAGATCTTGTGGGGAATTGCTGCATAAAGATCCCTTCTAACTTGGGGGACTTAATCCACTTAAGGCCTATCATGCTACGTGGCCACCGTTCAAAATTAGATGGTGATGTTATGTGGAATCTTCAAACCATCTCATGCATTGCACTCAATAGACAAACAACATCTCTCATTGAGAAAGGAAGGTTCCCCAAATTAAGAAAGTTGGGGTTGCGTATAGCTTCAGATTGCGACGGTAAATTGCCAAAAATGGTGCTAAGCCTACAACAATTAAGTCATTTGGATGAGTTGGAAATCGCCTTCCAACTAGAGTATTATAGTAGTAAAAGGAAGATTGGTTCTCAAGAACTATTACAAAGCCTAGAGCAATTAAGTCAGTTAAGTGTTTTAAAAATTGTGAATGCCATGGACCTTCCAACATGTGGGCAATCGTTTCCTCCAAACATTACCAAGTTAACATTGTCAGGTGGGTTCCCGCAATTGCAGATGTTTCAGATGAGAGATTGGCGTGTCAAAAACTGGGAACTAGCCAATAGTGCAATGCCACGCCTTCAAAGCCTAGTCATTGATCGTTGTCGTGGGTTGGTTAGTCTCCCAAACGCACTGTGGTCTTTGACTGACTTAAGGAAAGTGTTGATTAGGGAACCCTCAGAAGCAATGGCTTCCATGCTTCGTAATTTGGAAATGAAGATTAGGTGTGAACTCATAGTAGGATAA 2475 0.442 MADSVVSFLLQNLSQLLANEAKLLCGVEDRIRSLHNELEMINVYLKTSEGKKSKKEIEQKVASQIRDVSHMAEDVIDTFLANVAMHKRRSVLGRMIHGVDHAKLLHDVAETIDKIKTTIIKICDNKIKYDFPESSDQSTSAREEEERAQSLHKRRRNVEEEDVVRLVHDSKAIINRLVEGDSSRNIASIIGMGGLGKTTLARKVYNSEEVKRHFNCRAWVYVSNECRARELLLGLLQDLMPKAEYECRGNKKDKKNKETDKPRDFSSLTEDELKIKVREFLKRKRYLMVLDDLWRKQDWDEIQDAFPDENRGSRILITSRLKEVALHTSQDPPYYLQFLNEEQSWELFFKKVFRGEKCPSDLEPLGRQIVQGCRWLPLSIVVLAGLLANKEKSHKEWSKVVGHVNWYLSRDETQVKDIVLKLSYDNLPRRLKPCFLYLGIFPEDSEICVRQLLQRWVAEGFIQEIGSRDPDDVAEDYLYELIDRSLIQVARVKTCGSVKTCRIHDLLRDLCISESKEDKVFEVCTDVNVLIPTKPRRLSIHCSMARYISSSSNDHSCVRSLFCFDPCYYVARSEWKRLSKSFKLVRVLDLVGNCCIKIPSNLGDLIHLRPIMLRGHRSKLDGDVMWNLQTISCIALNRQTTSLIEKGRFPKLRKLGLRIASDCDGKLPKMVLSLQQLSHLDELEIAFQLEYYSSKRKIGSQELLQSLEQLSQLSVLKIVNAMDLPTCGQSFPPNITKLTLSGGFPQLQMFQMRDWRVKNWELANSAMPRLQSLVIDRCRGLVSLPNALWSLTDLRKVLIREPSEAMASMLRNLEMKIRCELIVG* 825
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g00200 824 PRINTS Disease resistance protein signature 373 387 - -
Rops3g00200 824 PRINTS Disease resistance protein signature 186 201 - -
Rops3g00200 824 PRINTS Disease resistance protein signature 765 781 - -
Rops3g00200 824 Pfam Rx N-terminal domain 5 88 IPR041118 -
Rops3g00200 824 Coils Coil 141 161 - -
Rops3g00200 824 Pfam NB-ARC domain 171 425 IPR002182 GO:0043531
Rops3g00200 824 Gene3D - 141 331 IPR027417 -
Rops3g00200 824 Gene3D - 424 514 IPR036388 -
Rops3g00200 824 Gene3D - 5 120 - -
Rops3g00200 824 Gene3D Ribonuclease Inhibitor 572 817 IPR032675 -
Rops3g00200 824 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 152 438 IPR027417 -
Rops3g00200 824 FunFam Probable disease resistance protein At1g61300 145 333 - -
Rops3g00200 824 SUPERFAMILY L domain-like 502 798 - -
Rops3g00200 824 MobiDBLite consensus disorder prediction 133 155 - -
Rops3g00200 824 CDD RX-CC_like 2 122 IPR038005 -
Rops3g00200 824 FunFam Probable disease resistance protein At1g63360 424 513 - -
Rops3g00200 824 PANTHER DISEASE RESISTANCE PROTEIN RP 33 790 IPR044974 GO:0006952
Rops3g00200 824 Gene3D - 338 423 IPR042197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g00200 Rops-Chr3 2615532 2618492 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g00200 187 510 WRKY Transcription Factor Family AT5G45050 23.476 2.72e-06 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g00200 - - mtr:25492796 1031.94