Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g00193 ATGGCTCCTTCATCTCTGAGTATCGCTGATTCACAGCCTCCATCAACAACACTCGAAGCCTCAGAGAATGATCTTCAGCCATTTTTTGTTCTTCATAAAGCTTCATCCCGACGAAAAGATAGAACATCATCAGGGCAGGGAAAAGTGCGCAAGAGAAGTGAACCATCTTCATCATCGCCACAAAGTGCAAAGAAACTGGAAGGAAGTATGACTGAAGAATGTGATCACCATTTTCTTCAGCAACTGCAGATTGAAACTTTTGACATTGTTTGGACAAAGATTGAATCTACGATTAAGGACGTTTTGAGAGATCTAAACGCTAGCGTATTTAATGACATACAGCAATGGGTTCAGGAATGCTTCAATGCTTCCAGATTGCTTGGAGAACCTAGTGTTGCTGAAGCAACTAGGTCTTTTCCTGTTCTAAATAATACTATTCCTGAGCAGCTGTTCACTGCGTTAGTTATTACCAGAAACATAGAGTTTGTTGATGATATATTGACATTTGGAGAGCTTGGCCATTTCTTGAAATCCCATGGTTGTCACGTGGCTATGCTTTCATCACTGGAATTTTCCTTAAAAACTGGGATTGTTGGTTGCGTGAAAGCTTTATTGCGAGAGTTTCTAGGGGGTGCTATCGACTCAGCTGATATATCAATCTTAGCATCATGGTATAGAGAACAAGACAACTACAATAAACCACTAGTGCTGATCATTAATGATTTGGAAAGATGTTGTGGATCAGTCTTAACTGATTTTATCCTGATGTTGAGTGAACGGGTTGTCAAGGTGCCAGTCATCTTAGTATTTGGAGTTGCAACAACAGTGTATACCCCAAGACACATTCTACCATCACATGCTCTTGAGCGTTTGTGCCTCTCTAAGTTCATGCTTGGAACGCCAGCTGAGAGAATGGATGCAATTGTTGAGGCTGTTCTTGTGAAACGTTGCACCACATTTATTATTGGTCATAAAGTGGCACTCTTCCTGAGAAACTACTTCATCAACCAGGATGGGACAGTAACATCTTTTATAAGAGCTTTGAAGGTTGCATGCTTATTACATTTCTCTATGGAACCTCTGAGTCTCATACAAGGGCGAATACTCACTGAAGACCAAAATGAGGGAAAATCTGCATTATCACCCGAGACTATGTTGAAATACATGGATGAAATTCCATCATGCACAAGGAATCAAATAATTGATCGGACTAAAAAGAACATGGCTGAGGGTTTGTCAGAATTGCTGACAGTGCAGAAGCTATGGAGCACTGTGGTTCTGTGCCTATATGAAGCTGGAAAATATAGCAGGGTGCGACTGCTGGATTTGTTTAGTGAAGCGCTCAATCAGGATTTGTACCCGTCAAGGGATCCTGGTTGTCAAGTAGGTGATGAAAAAGATCGTGGGTTGTCCTCGACAAATGATCCCTGTCAACAATATTCCATCATGCAAGGCGATGGTTTTATTCGCCAGATAGTGCGCAAAATGAGGGATCTCCCTACAGAAATGCTATATCAGCTGATCGAGAGCTGGGAAAAACTTACTGCAGATATTCCAGAGATTCATCAGAAACTGAAAAGGTTGCAATCTTCAGTAATATGTGAAGATGGAAAAAGTCCACGCAAGAGTTCCAAGGACATTTCCAAGAGACATACGTCCAGGGTTTCGGTAAACATAGACAAGGACTCGAGAATGTTAAACTCGCAAACTATTGCATTTCTTGACTGTTTAGTTAGAAATTTTTTGAGGCCCATTGAAGGAATGACTTTCCATGAAATTTTCTGCTTCAAGAATGTTGAAAAGCTTCAATTGGTTTTGATCGGAGATCCAAGAAGAAGGATTCAAGTTGATCTGTTGGAGTTCCATAAGATTTTAAGGTGCAGTTGCTGTAACAAGAATGGTAATGCCCTATTGCCATCCAGCCATGATTCCTCAATTATGTATTCCCTGGCTCAAGAGCATGGAGATCTTATCAATCTTCATGACTGGTTCCAATCTTTTAGGACAATTGTTCTTCAACATACGAATAAACGGAAACCAAAATCAAAGCAATCCCCGCTGCCAAAGAAGCGAAAAGACATGAATGGATCTGGAGACCAAAATGAAGCATCAATTCAAGCACGCTTTTGCAGGGCCGTCACAGAGCTGCAGATCATTGGGTTAGTTAGAATGCCGAGCAAAAGACGCCCAGATTTTGTACAAAGAATAGCATTTGGACTTTGA 2223 0.4103 MAPSSLSIADSQPPSTTLEASENDLQPFFVLHKASSRRKDRTSSGQGKVRKRSEPSSSSPQSAKKLEGSMTEECDHHFLQQLQIETFDIVWTKIESTIKDVLRDLNASVFNDIQQWVQECFNASRLLGEPSVAEATRSFPVLNNTIPEQLFTALVITRNIEFVDDILTFGELGHFLKSHGCHVAMLSSLEFSLKTGIVGCVKALLREFLGGAIDSADISILASWYREQDNYNKPLVLIINDLERCCGSVLTDFILMLSERVVKVPVILVFGVATTVYTPRHILPSHALERLCLSKFMLGTPAERMDAIVEAVLVKRCTTFIIGHKVALFLRNYFINQDGTVTSFIRALKVACLLHFSMEPLSLIQGRILTEDQNEGKSALSPETMLKYMDEIPSCTRNQIIDRTKKNMAEGLSELLTVQKLWSTVVLCLYEAGKYSRVRLLDLFSEALNQDLYPSRDPGCQVGDEKDRGLSSTNDPCQQYSIMQGDGFIRQIVRKMRDLPTEMLYQLIESWEKLTADIPEIHQKLKRLQSSVICEDGKSPRKSSKDISKRHTSRVSVNIDKDSRMLNSQTIAFLDCLVRNFLRPIEGMTFHEIFCFKNVEKLQLVLIGDPRRRIQVDLLEFHKILRCSCCNKNGNALLPSSHDSSIMYSLAQEHGDLINLHDWFQSFRTIVLQHTNKRKPKSKQSPLPKKRKDMNGSGDQNEASIQARFCRAVTELQIIGLVRMPSKRRPDFVQRIAFGL* 741
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g00193 740 MobiDBLite consensus disorder prediction 33 48 - -
Rops3g00193 740 PANTHER ORIGIN RECOGNITION COMPLEX SUBUNIT 3 20 739 IPR020795 GO:0003677|GO:0005664|GO:0006260
Rops3g00193 740 MobiDBLite consensus disorder prediction 675 700 - -
Rops3g00193 740 Pfam Origin recognition complex (ORC) subunit 3 N-terminus 66 205 IPR045667 -
Rops3g00193 740 Pfam Origin recognition complex (ORC) subunit 3 N-terminus 231 363 IPR045667 -
Rops3g00193 740 MobiDBLite consensus disorder prediction 1 70 - -
Rops3g00193 740 MobiDBLite consensus disorder prediction 1 23 - -
Rops3g00193 740 CDD Orc3 85 364 - -
Rops3g00193 740 MobiDBLite consensus disorder prediction 49 66 - -
Rops3g00193 740 Pfam Origin recognition complex winged helix C-terminal 611 738 IPR040855 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g00193 1 672 Core DNA Replication Machinery Family AT5G16690 45.906 0.0 608
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g00193 K02605 - gmx:100780646 1169.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops3g00193 3 2526313 2543213 Rops3g00193 3 2526313 2543213 ECH