Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g00185 ATGCAGAAGAGTTACATGGAAGCCTGGTTCATCATCACTGTTCTGTGCCTTTGCCTTTCATTGATTCTCAAAACCATACGTAAACTCCTCTTTCCCCATTCTCCCCTCCCTCCAGGGCCTCCTAAAGTGCCCATAATATGCAACTTTACATTGTTGCAACAATACATTACAGATCCGAAAACACTTCTCCAAAATCTTCATGCAAAATATGGTCCAATCTTCACTCTTCACATTGGTTCTCACACTGACATCTTCATTGCCAATCGTTTCCTTGCTCATCAAGCTTTGATTCAAAATAGCACCATCTTTGCAGATCGCCCTAAGGCACTTCCCACCAAGAAGATCATTAGCAGTAACCAACATGACATCCTTTTTAGCTTCTATGGCCCCATATGGCGCCTCCTTAAACGCAACCTCACTTCAAGAATCCTTCACTCCTCACAGGTTAAGTCCTGTGCACATGCACGTAAATGGGTGTTAGATATGCTTCTAGAACGCCTTAAATCTGATTCACATGCAAGCAACCCCACTAGGGTCATTGACCATTTTCGATATGGCATGTTCTGCTTGCTTGTTCTAATGTGTTTAGGTGACAAAATTGATGAGAAGCAAATAAGAGAAATTGAGGATAGTCAACGTGGTATGCTTTTGAGTTTTGCTAGATACAATGTCTTGAATTTTTGGTCACCAATTACTAGGATATTGTTTTGGAAGAGGTGGAAGGAATTCTTAAAGCTAAGACGAGACCAAGAAGCTGTGTTGATTCCTTATATAAATGCTAGAAGGAAAGCCAAGGAAGAGAGAATAAGGAATGGCTCAGATGATTTTGTTTTGTCATATGTGGATACTTTGTTGGATTTGGAATCCTTGGAGGAAGAGGAGGGGATCAAGCTTGATGATGGTAAAATTTGCACCTTATGCTCAGAGTTTCTGAATGCTGGAACAGATACAACTTCAACAGCATTGGAATGGATCATGGCAAACTTGGTGAAATATCCAGATATCCAAGAAAGGCTTGTGGAGGAAATTAGAGGGGTGATGGTTGATAGAGAGGATAAGGAAATCAAAGAGGAAGATTTGCAGAAATTGCCATATCTTAAAGCTGTGATTTTGGAGGGGTTGAGGCGTCACCCACCACTACACTATGTGGCTCCTCATAGAGTAACCAAGGATGTTGTTTTGAATGGTTATTTGGTGCCTACCTATGCCTCTGTGAATTTCCTAGTGGCTGAGATAGGGAGGGACCCTACAGCTTGGGATGACCCTATGGCTTTTAAGCCAGAAAGGTTCATGAATAACAGTGAGCAAAATGGAGGCACAACATTTGATATAATGGGAAGTAAAGAGATAAAAATGATGCCATTTGGGGCAGGGAGGAGAATGTGTCCTGGCTATGGTTTAGCAATGCTGCACTTAGAGTACTTTGTGGCCAATTTTGTTTGGAATTTTGAGTGGAAGGCCATGGATGGAGAAGTAGTTGATCTGTCAGAGGAGCTGCAATTCACTATGGTGATGAAGAATCCATTAAAAGTTCATATATTACCTAGGCTTTAG 1554 0.4144 MQKSYMEAWFIITVLCLCLSLILKTIRKLLFPHSPLPPGPPKVPIICNFTLLQQYITDPKTLLQNLHAKYGPIFTLHIGSHTDIFIANRFLAHQALIQNSTIFADRPKALPTKKIISSNQHDILFSFYGPIWRLLKRNLTSRILHSSQVKSCAHARKWVLDMLLERLKSDSHASNPTRVIDHFRYGMFCLLVLMCLGDKIDEKQIREIEDSQRGMLLSFARYNVLNFWSPITRILFWKRWKEFLKLRRDQEAVLIPYINARRKAKEERIRNGSDDFVLSYVDTLLDLESLEEEEGIKLDDGKICTLCSEFLNAGTDTTSTALEWIMANLVKYPDIQERLVEEIRGVMVDREDKEIKEEDLQKLPYLKAVILEGLRRHPPLHYVAPHRVTKDVVLNGYLVPTYASVNFLVAEIGRDPTAWDDPMAFKPERFMNNSEQNGGTTFDIMGSKEIKMMPFGAGRRMCPGYGLAMLHLEYFVANFVWNFEWKAMDGEVVDLSEELQFTMVMKNPLKVHILPRL* 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g00185 517 SUPERFAMILY Cytochrome P450 37 516 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops3g00185 517 PRINTS E-class P450 group I signature 322 348 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops3g00185 517 PRINTS E-class P450 group I signature 408 432 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops3g00185 517 PRINTS E-class P450 group I signature 367 385 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops3g00185 517 PRINTS E-class P450 group I signature 91 112 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops3g00185 517 PRINTS E-class P450 group I signature 67 86 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops3g00185 517 PRINTS E-class P450 group I signature 452 462 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops3g00185 517 PRINTS E-class P450 group I signature 302 319 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops3g00185 517 PRINTS E-class P450 group I signature 462 485 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops3g00185 517 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 13 508 - -
Rops3g00185 517 FunFam Cytochrome P450 family protein 31 517 - -
Rops3g00185 517 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 455 464 IPR017972 GO:0005506|GO:0016705
Rops3g00185 517 CDD CYP77_89 69 510 - -
Rops3g00185 517 Gene3D Cytochrome P450 32 517 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops3g00185 517 PRINTS P450 superfamily signature 462 473 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops3g00185 517 PRINTS P450 superfamily signature 453 462 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops3g00185 517 PRINTS P450 superfamily signature 313 330 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops3g00185 517 PRINTS P450 superfamily signature 368 379 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops3g00185 517 Pfam Cytochrome P450 37 510 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g00185 Rops-Chr3 2466613 2468166 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g00185 6 516 Cytochrome P450 AT1G64940 53.269 0.0 552
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g00185 K24184 - gmx:100816275 840.491