Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g00165 ATGGCCAAGAAGAAGAGCTGGTTTAGTCTGGTGAAGAGGCTCTTTATATGGGACACGCATTCCACACAAGAGAAGAAGGAGAAAAGAAGGAAATGGATATTTGGAAGGTTAAAGACCAAGAGATTACCTTCAATTACAGCTCCACAAATATCAAAAGAAACAACACTAAGTGAAGCAGAGGAGGAACAGGGCAAGCATGCTTTAACAGTGGCCATTGCCTCAGCTGCTGCTGCTGAAGCTGCTGTTACTGCTGCTCAGGTTGCTGCTCAGGTTGTTAGGCTCACTGGGGTCTCACAATCAACCCATCAACGTCAAGAAAACTCAGTAGAATCTCAACTTGTTCAAACTAGAAATGGTGCTTCTCAATTCCCATACCAGTGCCAGATGGAGATTAAAGAATCTGCAGCCATCAAAATTCAAACTGCCTTTCGGGGTTACCTTGCAAAGAAGGCTTTGAGGGCATTGAAGGGAATAGTGAAGCTTCAAGCTATCATTCGTGGCCGAGCAGTAAGACGCCAAGCTATTAGTACTTTGAAGTGTTTGCAGTCCATTGTAAGTATCCAGTCACAGGTCTGTGCAAGGAGACTCCAAATGGTTGAAGGGAGATGGGATTGTGCTGAAAATGAAGAGATGCAAGATTCTAAAGACAAGATAATTAGGATGGACTCAAACAGTCAAAGAAAGTGGGATGACAGCACTTTATTGAAGGAAGAGGTAGATGCTTATTGCATAAGCAAGAAAGAAGCAATTCTCAAGAGGGAAAGAATAAAAGAATACTCATTTAACCATCGAAGGTCAGAAGAGACAGATAGAAGTAAGGCAAATGGAAGATGGAGGTACTGGCTGGAGCAGTGGGTAGATACACAACTTTCTAAAAGTAAAGAACTTGAAGATTTAGACTCAGTTTTCAGCTCACATTCTAGAGCTGGTGAGGAATATGGAGGAAGGCAACTTAAGCTGAGAAGTATTCAGAGACAAAATCCAGTTGAAGGATTAGATTCACCAATACTTGCTTCAAGAAAATCTTTTCCTCACAGGAGGCAGTGTTCAGTGGGAGAAGATCACTCATTTTCAAGCTCTCCTTCAACTCCAGCATACATGGCTGCAACAGAATCAGCAAAAGCAAAAGCAAGATCAACAAGCTCCCCAAAAGCAAGAACTGGGAATTTGGACATGAACTCCGATAGCTATTCTCCATGCAAGAAAAAGCTATCTATTGTCTCTTATGTTAACAATGAAGTGCTTAATAGTGGTAGGATGGGCAAGCTCAGTGGTAACCAGCAAAGATCTCCAAGCTTCAAGGGACTTTCAATGCCTATAAAATCAAGCAGGACTATAAAGGATCTCAGCATTAATTCAGACTGCTCAGTGCCTAATTGGGATAGGCAAAGCTCCTTCAAATGA 1404 0.4209 MAKKKSWFSLVKRLFIWDTHSTQEKKEKRRKWIFGRLKTKRLPSITAPQISKETTLSEAEEEQGKHALTVAIASAAAAEAAVTAAQVAAQVVRLTGVSQSTHQRQENSVESQLVQTRNGASQFPYQCQMEIKESAAIKIQTAFRGYLAKKALRALKGIVKLQAIIRGRAVRRQAISTLKCLQSIVSIQSQVCARRLQMVEGRWDCAENEEMQDSKDKIIRMDSNSQRKWDDSTLLKEEVDAYCISKKEAILKRERIKEYSFNHRRSEETDRSKANGRWRYWLEQWVDTQLSKSKELEDLDSVFSSHSRAGEEYGGRQLKLRSIQRQNPVEGLDSPILASRKSFPHRRQCSVGEDHSFSSSPSTPAYMAATESAKAKARSTSSPKARTGNLDMNSDSYSPCKKKLSIVSYVNNEVLNSGRMGKLSGNQQRSPSFKGLSMPIKSSRTIKDLSINSDCSVPNWDRQSSFK* 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g00165 467 MobiDBLite consensus disorder prediction 374 396 - -
Rops3g00165 467 MobiDBLite consensus disorder prediction 353 367 - -
Rops3g00165 467 Pfam Protein of unknown function (DUF4005) 354 430 IPR025064 -
Rops3g00165 467 SMART iq_5 131 153 IPR000048 GO:0005515
Rops3g00165 467 MobiDBLite consensus disorder prediction 347 396 - -
Rops3g00165 467 MobiDBLite consensus disorder prediction 418 439 - -
Rops3g00165 467 Pfam IQ calmodulin-binding motif 134 153 IPR000048 GO:0005515
Rops3g00165 467 Gene3D - 129 183 - -
Rops3g00165 467 ProSiteProfiles IQ motif profile. 132 160 IPR000048 GO:0005515
Rops3g00165 467 ProSiteProfiles IQ motif profile. 156 183 IPR000048 GO:0005515
Rops3g00165 467 PANTHER IQ-DOMAIN 5-RELATED 1 405 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g00165 Rops-Chr3 2270476 2273486 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g00165 1 467 IQD Protein Family AT5G13460 45.062 1.84e-117 350
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g00165 - - gmx:100800192 743.421