Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Rops3g00162 | ATGGAGAAGTACCTGAGAGAAAACTTCAACGTGCAGCCCAAGAACCCCTCAGAAGCCGCCCTTCGCCGATGGAGATCCGCCGTCTCCGTCGTCAAGAACCCCCGCCGCCGCTTCCGCATGGTGGCCAATCTCGCCCAACGTGCCGACGCCGAACAAAAACGCAAAAAACTCCAGGAAAAGATACGGGTGGCTCTCTATGTGCAAAAAGCAGCGTTGCATTTTATTAACGCTGCCGCTGGGAGTCAAGGTGGTTACATGCTCTCCAAAGAGATTCAGGAAGCTGGTTTCGGAATTGAGCCCGATGAATTAGCATCTATTGTTCGATCCCATGACACCAAATGTTTAGAACATCATGAAGGAGTTGAAGGAATAGCAAAAACTGTCCGTGTGTCACTGCAAGAGGGCGTTAGTTCATACGATGTACAACATAGACAAAATATCTATGGTTTTAACCGCCATGCAGAGAAGCCCTCTAGAAGTTTTTGGATGTTCGTTTGGGATGCAATGCAAGACTTGACTCTAATCATCCTTATGGTATGTGCTGTGATTTCAGTAGGTGTTGGAATCTCAACTGAAGGTTGGCCAAAAGGTATGTATGATGGAGTGGGAATCATACTATGTATTATTTTAGTGGTCTTTGTCACTTCCATCAGTGACTATAAACAGTCTTTGCAATTTAAGGATTTGGATAAAGAAAAGAAAAATGTCAGCATTCAAGTCACGAGAGATGGTAGAAGACAAAAGGTTTCAATCCATGAACTGGTGGTGGGAGACATAGTCCTTCTGTCCATAGGAGATATAGTTCCAGCAGATGGGTTATTCATATCAGGTTTTGGCTTATTAATCGATGAATCAAGTCTATCAGGTGAGAGTGAGGCTGTGAATGTTGACCAGCAGAAGCCTTTTCTTCTATCCGGGACCACGGTGCAAGATGGGTCTGCTAAGATGCTAGTCACTTCCGTTGGTATGAGGACTGAATGGGGAAGGTTGATGGAAACTCTGAACGAAGGGGGAGACGATGAGACACCTCTTCAGGTCAAATTAAATGGGGTTGCGACCATTATTGGCAAGATAGGCTTGGGTTTTGCCCTGCTGACATTCCTCGTTCTTACTGGCAGGTTTTTGTTGGAGAAAATAGCTAACCATAAGATCAAAGAATGGTCTCTAAATGATGCATCCATGCTTCTCAATTTCTTTGCTACTGCTGTCATTATTATAGTTGTGGCAGTTCCCGAGGGGCTGCCTTTGGCAGTAACACTAAGCCTTGCATTTGCAATGAAGAAACTGATGAATGATAAGGCACTAGTCAGGCACCTCTCTGCATGCGAGACAATGGGCTCTGCCGGTTCTATTTGCACGGATAAGACGGGGACTTTGACTACAAATCACATGGTCGTTGACAAAATATGGATTTGCGAACAAACTAATGCAATTAAAAGCGGCAACAGTGATAATGGGTTGAAGAACTCATTGTCTGAAAAGACATTTGATCTCCTTTTGCAGTCCATATTCCAGAATACCGGCTCAGAGGTAGTCAAAGGGCCAGATGGAAAGAACAAGGTCATGGGTACTCCAACCGAGTCGGCATTGCTGGAATTTGGTTTGCTTTTGGGAGGTGATTCTAAGTTTTATAATGAGAAGTATAAGATACTGAAGATTGAACCTTTCAATTCAAACAAAAAAAAGATGTCAGTGCTTGTGGCTCTTCCTGATGGCACCAACAAGTCTCGAGCATTTTGTAAAGGAGCATCAGAAATAGTTGTGAAAATGTGTGACAGAGTTGTTAATGCAGATGGCGAAGCCTTCCATTTGAATGAACAACAAAGAAATAGCATCACAAAAGTTATCAATTGTTTTGCTTCTGAGGCTCTGAGAACACTCTGCATAGCCTTCAAGGATATTGAAGGATCCTCTGAGGGTGATAGTATTCCGGAGGATAAGTACACGTTAATAGCTATTATTGGGATCAAGGATCCAGTGAGGCCTGGAGTAAAGGAAGCTGTTAAGACTTGTCTAGCAGCTGGGATTACCGTTAGAATGGTAACTGGTGACAACATAAATACTGCTAAAGCAATAGCTAGAGAATGTGGCATCTTGACAGATGGATTGGCCATAGAGGGACCAGATTTCCGGAACAAGACCCGGAAAGAAATGCAAGAGATAATACCAAAAATACAGGTAATGGCTCGATCCTTGCCTCTTGACAAGCACACCTTGGTGACCCATTTGAGAAATGACTTTAATGAAGTTGTGGCAGTAACTGGGGATGGGACCAATGATGCTCCAGCATTGCATGAGGCTGATATTGGATTTGCTATGGGTATTGCTGGCACAGAGGTTGCAAAAGAGAATGCAGATGTGATTGTAATGGATGATAATTTCACCACCATAGTGAATGTTGCCAGATGGGGCCGTTCTGTTTATATTAATATACAAAAGTTTGTCCAGTTCCAGTTAACAGTTAATGTTGTAGCTCTCATGCTGAATTTTGTTTCAGCATGCGTGTCGGGCTCTGCTCCTCTTACTGCTGTTCAGATGCTTTGGGTAAACATGATCATGGACACTCTCGGTGCATTGGCACTGGCAACAGAACCTCCCCATGATGGGCTGATGAAGAGGCCACCTGTAGGAAGGGACGCCAAATTCATCACCGGGGTCATGTGGAGGAACATTATTGGTCAGAGCATCTATCAAACTATTGTCCTTTTGGTTCTCAAATTTCGTGGGAAACAGATTCTCAAGCTCAATGGACCTGATGCCACCTCTGTTCTGCACACCGTCATTTTCAACACCTTTGTGTTTTGCCAGGTATTCAACGAGGTAAACAGCCGTGACATGGAGAAGATTAATGTTTTTCGAGGCATGTTCAGCAGCTGGATTTTCCTGATGGTCCTGGCCTCAACGATATGCTTTCAATTCATAATAGTACAATATCTGGGTACTTTTGCTCAAACAGTGCCACTGAGCTGGGAGTTGTGGTTAGTCAGCGTCATGATTGGTGCGGTAAGTTTACTCGTAGCTGTTGTCCTAAAGTGCATCCCAGTTCCTGTGAGTAATTATGTCGCCACTCATCATGATGGTTACGAGCAGCTTCCCAGTGGACCAGAGCTGGCATGA | 3117 | 0.4415 | MEKYLRENFNVQPKNPSEAALRRWRSAVSVVKNPRRRFRMVANLAQRADAEQKRKKLQEKIRVALYVQKAALHFINAAAGSQGGYMLSKEIQEAGFGIEPDELASIVRSHDTKCLEHHEGVEGIAKTVRVSLQEGVSSYDVQHRQNIYGFNRHAEKPSRSFWMFVWDAMQDLTLIILMVCAVISVGVGISTEGWPKGMYDGVGIILCIILVVFVTSISDYKQSLQFKDLDKEKKNVSIQVTRDGRRQKVSIHELVVGDIVLLSIGDIVPADGLFISGFGLLIDESSLSGESEAVNVDQQKPFLLSGTTVQDGSAKMLVTSVGMRTEWGRLMETLNEGGDDETPLQVKLNGVATIIGKIGLGFALLTFLVLTGRFLLEKIANHKIKEWSLNDASMLLNFFATAVIIIVVAVPEGLPLAVTLSLAFAMKKLMNDKALVRHLSACETMGSAGSICTDKTGTLTTNHMVVDKIWICEQTNAIKSGNSDNGLKNSLSEKTFDLLLQSIFQNTGSEVVKGPDGKNKVMGTPTESALLEFGLLLGGDSKFYNEKYKILKIEPFNSNKKKMSVLVALPDGTNKSRAFCKGASEIVVKMCDRVVNADGEAFHLNEQQRNSITKVINCFASEALRTLCIAFKDIEGSSEGDSIPEDKYTLIAIIGIKDPVRPGVKEAVKTCLAAGITVRMVTGDNINTAKAIARECGILTDGLAIEGPDFRNKTRKEMQEIIPKIQVMARSLPLDKHTLVTHLRNDFNEVVAVTGDGTNDAPALHEADIGFAMGIAGTEVAKENADVIVMDDNFTTIVNVARWGRSVYINIQKFVQFQLTVNVVALMLNFVSACVSGSAPLTAVQMLWVNMIMDTLGALALATEPPHDGLMKRPPVGRDAKFITGVMWRNIIGQSIYQTIVLLVLKFRGKQILKLNGPDATSVLHTVIFNTFVFCQVFNEVNSRDMEKINVFRGMFSSWIFLMVLASTICFQFIIVQYLGTFAQTVPLSWELWLVSVMIGAVSLLVAVVLKCIPVPVSNYVATHHDGYEQLPSGPELA* | 1039 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Rops3g00162 | 1038 | CDD | P-type_ATPase_Ca_PMCA-like | 141 | 887 | - | - | |
| Rops3g00162 | 1038 | SUPERFAMILY | Calcium ATPase, transmembrane domain M | 117 | 1015 | IPR023298 | - | |
| Rops3g00162 | 1038 | FunFam | Calcium-transporting ATPase | 771 | 1017 | - | - | |
| Rops3g00162 | 1038 | SFLD | p-type atpase | 434 | 806 | IPR044492 | - | |
| Rops3g00162 | 1038 | SMART | Cation_ATPase_N_a_2 | 115 | 189 | IPR004014 | - | |
| Rops3g00162 | 1038 | PRINTS | P-type cation-transporting ATPase superfamily signature | 452 | 466 | - | - | |
| Rops3g00162 | 1038 | PRINTS | P-type cation-transporting ATPase superfamily signature | 652 | 663 | - | - | |
| Rops3g00162 | 1038 | PRINTS | P-type cation-transporting ATPase superfamily signature | 778 | 790 | - | - | |
| Rops3g00162 | 1038 | PRINTS | P-type cation-transporting ATPase superfamily signature | 674 | 684 | - | - | |
| Rops3g00162 | 1038 | PRINTS | P-type cation-transporting ATPase superfamily signature | 754 | 773 | - | - |
Showing 1 to 10 of 39 entries
Duplication type information
Functional genes information
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Rops3g00162 | K01537 | - | gmx:100805063 | 1793.48 |
Showing 1 to 1 of 1 entries
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Rops3g00162 | 3 | 2220140 | 2227519 | Rops3g00162 | 3 | 2220140 | 2227519 | ECH |
Showing 1 to 1 of 1 entries