Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g00152 ATGGTTTGGGTCATCATCAAGGAGGAGGGGACAGGATTGGGGGTACAATGATGTAGAACAAACAATGTGCCAATCTGCCTCATATACGGAAAAGAAAATCCCTGGGTGAAGCCAATTTGGGGACTCCAGATTAAAAGGCAAGTGCCTGAAGCTCCATATTATCAAATCAGCCCTGCTGGTCACTGCCCTCATGATGAAGTCCCTGAGGTTATAAATTTCTTATTACGTGGCTGGATCAGAAACCTAGAGTCTCAGGGTTCTATTTCATTGCCATTGCTGGATGAATTAGACAGCATGAAACACACTGATGCTAGGGAATTAGAATTTATCAGAGAAGGTTCAAGAAAATCAGTGATGCGACCATGGCCACCGCTTCAGTCTGTGGAGGCTACAAGGTTGAGAAAACCTTCAAGTCATGCTAGGGAGCAGTATACTGCTATTGTGATCCAAACTTCTTTAAGAGGGTATCCGGCAGGAAGAGCTCTTCGAGAACTTAAAGGGTTGGTGAAGTTGCAAGCTTTAGTGAGAGGTCACAATGTTAGGAAGCAAGCAAAGATGACCCTTCGGTGCATGCAGGCTTTGGCTAGAGTACAAACAAGGGTCCTTGACCAACGCATAAGGACTTCCAACTCTTGA 636 0.4513 MVWVIIKEEGTGLGVQ*CRTNNVPICLIYGKENPWVKPIWGLQIKRQVPEAPYYQISPAGHCPHDEVPEVINFLLRGWIRNLESQGSISLPLLDELDSMKHTDARELEFIREGSRKSVMRPWPPLQSVEATRLRKPSSHAREQYTAIVIQTSLRGYPAGRALRELKGLVKLQALVRGHNVRKQAKMTLRCMQALARVQTRVLDQRIRTSNS* 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g00152 210 Pfam IQ calmodulin-binding motif 168 184 IPR000048 GO:0005515
Rops3g00152 210 Gene3D alpha/beta hydrolase 7 85 IPR029058 -
Rops3g00152 210 ProSiteProfiles IQ motif profile. 163 192 IPR000048 GO:0005515
Rops3g00152 210 PANTHER PHEOPHYTINASE, CHLOROPLASTIC 16 118 IPR044211 GO:0015996|GO:0080124
Rops3g00152 210 Gene3D - 140 194 - -
Rops3g00152 210 ProSiteProfiles IQ motif profile. 141 169 IPR000048 GO:0005515
Rops3g00152 210 SUPERFAMILY alpha/beta-Hydrolases 19 80 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g00152 Rops-Chr3 1988269 2003914 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g00152 138 209 IQD Protein Family AT1G01110 81.944 1.62e-31 118
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g00152 - - gmx:100797968 191.43