Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Rops3g00152 | ATGGTTTGGGTCATCATCAAGGAGGAGGGGACAGGATTGGGGGTACAATGATGTAGAACAAACAATGTGCCAATCTGCCTCATATACGGAAAAGAAAATCCCTGGGTGAAGCCAATTTGGGGACTCCAGATTAAAAGGCAAGTGCCTGAAGCTCCATATTATCAAATCAGCCCTGCTGGTCACTGCCCTCATGATGAAGTCCCTGAGGTTATAAATTTCTTATTACGTGGCTGGATCAGAAACCTAGAGTCTCAGGGTTCTATTTCATTGCCATTGCTGGATGAATTAGACAGCATGAAACACACTGATGCTAGGGAATTAGAATTTATCAGAGAAGGTTCAAGAAAATCAGTGATGCGACCATGGCCACCGCTTCAGTCTGTGGAGGCTACAAGGTTGAGAAAACCTTCAAGTCATGCTAGGGAGCAGTATACTGCTATTGTGATCCAAACTTCTTTAAGAGGGTATCCGGCAGGAAGAGCTCTTCGAGAACTTAAAGGGTTGGTGAAGTTGCAAGCTTTAGTGAGAGGTCACAATGTTAGGAAGCAAGCAAAGATGACCCTTCGGTGCATGCAGGCTTTGGCTAGAGTACAAACAAGGGTCCTTGACCAACGCATAAGGACTTCCAACTCTTGA | 636 | 0.4513 | MVWVIIKEEGTGLGVQ*CRTNNVPICLIYGKENPWVKPIWGLQIKRQVPEAPYYQISPAGHCPHDEVPEVINFLLRGWIRNLESQGSISLPLLDELDSMKHTDARELEFIREGSRKSVMRPWPPLQSVEATRLRKPSSHAREQYTAIVIQTSLRGYPAGRALRELKGLVKLQALVRGHNVRKQAKMTLRCMQALARVQTRVLDQRIRTSNS* | 212 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Rops3g00152 | 210 | Pfam | IQ calmodulin-binding motif | 168 | 184 | IPR000048 | GO:0005515 | |
Rops3g00152 | 210 | Gene3D | alpha/beta hydrolase | 7 | 85 | IPR029058 | - | |
Rops3g00152 | 210 | ProSiteProfiles | IQ motif profile. | 163 | 192 | IPR000048 | GO:0005515 | |
Rops3g00152 | 210 | PANTHER | PHEOPHYTINASE, CHLOROPLASTIC | 16 | 118 | IPR044211 | GO:0015996|GO:0080124 | |
Rops3g00152 | 210 | Gene3D | - | 140 | 194 | - | - | |
Rops3g00152 | 210 | ProSiteProfiles | IQ motif profile. | 141 | 169 | IPR000048 | GO:0005515 | |
Rops3g00152 | 210 | SUPERFAMILY | alpha/beta-Hydrolases | 19 | 80 | IPR029058 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Rops3g00152 | Rops-Chr3 | 1988269 | 2003914 | Dispersed/Proximal |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Rops3g00152 | 138 | 209 | IQD Protein Family | AT1G01110 | 81.944 | 1.62e-31 | 118 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Rops3g00152 | - | - | gmx:100797968 | 191.43 |