Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g00130 ATGGACACTGATAATGATTTCACGTTTTGTCAGGTGAGTTCACCTATGGATCAGGATGGTCTTGAAACAAACAAGCTTGCTTCGGATATTGCTGACATTTCCATAAAAGAAGAATCCTCAAATGCTAGTAGTAGTAGTAGTAGTAGTCATGATAGTGGTTTCTTGCGGAAGGGTGGTTTACCGAATGATTCCAACTCCAAAAAGGAGGGTACAGTTGGTTCTTTGTCTTTCAGTGTAATTAGCATAGCTTCAAATCAGCCGAGTGAATCGACCACAAGATTAGTACCTGGTGATGCGAAGAATTCTCCTCAGAAGTCCCCAGAACAGAAGAATTCTGTTAAAAAGCCAGCTGTTCGAGCCAAAGTCCCTTTTGAAAAGGGGTACAGTCCAATGGACTGGGTCAAGCTTACCCGAACACATCCTGACCTTGCAGGTTTAAAAGGACAGTCAAACAGGAGACTTATTTCCATGGATGAAGTTCGACAACACCAAACAGAGGGCCAAATGTGGACTGTATTAAAAGGCCGTGTTTACAATATATCTCCATATATGAAGTTTCACCCTGGAGGTGTTGATATGTTGATGAAGGCCGTGGGAAAAGATTGCACATCTCTATTCAATAAATACCATGCTTGGGTTAACGCTGAATTCTTATTGGAGAAATGCCTTGTGGGTACCTTTGATGACAGCCGGTGA 696 0.4224 MDTDNDFTFCQVSSPMDQDGLETNKLASDIADISIKEESSNASSSSSSSHDSGFLRKGGLPNDSNSKKEGTVGSLSFSVISIASNQPSESTTRLVPGDAKNSPQKSPEQKNSVKKPAVRAKVPFEKGYSPMDWVKLTRTHPDLAGLKGQSNRRLISMDEVRQHQTEGQMWTVLKGRVYNISPYMKFHPGGVDMLMKAVGKDCTSLFNKYHAWVNAEFLLEKCLVGTFDDSR* 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g00130 231 Pfam Cytochrome b5-like Heme/Steroid binding domain 157 226 IPR001199 -
Rops3g00130 231 PANTHER CYTOCHROME B5 REDUCTASE 4 FAMILY MEMBER 1 229 - -
Rops3g00130 231 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 152 230 IPR036400 -
Rops3g00130 231 MobiDBLite consensus disorder prediction 34 53 - -
Rops3g00130 231 FunFam Cytochrome b5 reductase 4 150 231 - -
Rops3g00130 231 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 152 228 IPR001199 -
Rops3g00130 231 MobiDBLite consensus disorder prediction 1 21 - -
Rops3g00130 231 MobiDBLite consensus disorder prediction 1 70 - -
Rops3g00130 231 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 183 190 IPR018506 GO:0020037
Rops3g00130 231 Gene3D - 149 230 IPR036400 -
Rops3g00130 231 MobiDBLite consensus disorder prediction 86 111 - -
Rops3g00130 231 PRINTS Cytochrome B5 signature 177 187 IPR001199 -
Rops3g00130 231 PRINTS Cytochrome B5 signature 187 201 IPR001199 -
Rops3g00130 231 PRINTS Cytochrome B5 signature 215 227 IPR001199 -
Rops3g00130 231 SMART Cyt_b5_2 155 228 IPR001199 -
Rops3g00130 231 MobiDBLite consensus disorder prediction 86 121 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g00130 Rops-Chr3 1781615 1784427 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g00130 153 230 NADPH P450 reductases AT1G26340 39.744 2.06e-14 66.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g00130 - - ccaj:109814642 336.265