Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g00078 ATGCGTAAAGTGAGTGAGCATGACTCCCCCTGTTGGTATGATGACCAAGTTTCTTTCATGCAAGACTTGGACTCACCAAAGCAAAGCTCTCAATCTAATTTGGTCTACCAGCTACCATATCCTTGCAAGAAAGAGATAGACTTGCCATACCAATTGCCTCGCGAGCACTTTCTCCAGCTTCCACTTCTAGAGAGCCCAAAACTGCTTCAATCTGCTTCCACCATTACCTCTAATCCCATGGCAGCATTTGGTTTAGATGTGAACCATGCAACTACTCTGCTTCCCCCATCACTCCTACAAGAAGAACAAGTTCAACAAACTGGTCAACAAAACTTTCAGGCAATGTATGGCAGCAATAACAATGAACAAGCAGTTGATCTAGTCACTGATTGGCGAGTGCTTGACAAGTTTGTTGCTTCACAACTTAGTCAAGATGCATCCAAAGACAATAATAACTACTCAAACACAGGAAACATCTTTCATGGCACGGACAATAGCAATGCACAGTTCAAACATTTGGATAAACAAGACATGGTGCCTGAAAATGCCTCAACATCAAACTCCAGCTGTCCAATTGATTTGTGGAAATAG 591 0.4247 MRKVSEHDSPCWYDDQVSFMQDLDSPKQSSQSNLVYQLPYPCKKEIDLPYQLPREHFLQLPLLESPKLLQSASTITSNPMAAFGLDVNHATTLLPPSLLQEEQVQQTGQQNFQAMYGSNNNEQAVDLVTDWRVLDKFVASQLSQDASKDNNNYSNTGNIFHGTDNSNAQFKHLDKQDMVPENASTSNSSCPIDLWK* 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g00078 196 MobiDBLite consensus disorder prediction 179 196 - -
Rops3g00078 196 MobiDBLite consensus disorder prediction 146 166 - -
Rops3g00078 196 MobiDBLite consensus disorder prediction 177 196 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g00078 Rops-Chr3 973895 974485 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g00078 1 196 NAC Transcription Factor Family AT1G12260 34.272 6.43e-19 81.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g00078 - - gmx:100809525 286.574