Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g00071 ATGGAGGCCATTTCTTCCAAGCACCTTATCATATCCCTTTTCATAATTATTGCCTCTAGTTTCTCCACACACTCTGAAAAACCATATCAAGAAGCCAGCACGGTGTTCATTAGAACTTCTTGCAGCTCCACAACTTATCCAAGACTATGCTATAGCTCCTTGGTGAAGCATGCAGAGTTCATCCAGACAAATCGTGTGCTTTTAACAGGCACCGCCCTTAATGTGACTCTTGCATCAGCTAAAGCAACATCAACTATGATGTCAACGCTCTCTAAGAGCCGTGGGTTGAAGCCAAGAGAAGTTGTAGCCATGAAGGACTGTGTGGAGGTGCTGAGTGACTCAGTGGATGAACTCAGAAGATCGATTGCTGAGATGGGTCATCTTAGCAAGTCCAATTTTGAGGTAACAATGAGTGATGCACAAACTTGGGTTAGTGCTGCTTTGACGGATGAGAGCACGTGCACCGATGGGTTCCAAGAGAATGCTGCCAATGAAGATATTAAGACCACTGTTAGAGGGAGAATTGTTCAGGTTGCCCAATTGACTAGCAATGCATTGGCTTTGATAAATCAATTGGCCACTTCCCAGGGTTAA 594 0.4461 MEAISSKHLIISLFIIIASSFSTHSEKPYQEASTVFIRTSCSSTTYPRLCYSSLVKHAEFIQTNRVLLTGTALNVTLASAKATSTMMSTLSKSRGLKPREVVAMKDCVEVLSDSVDELRRSIAEMGHLSKSNFEVTMSDAQTWVSAALTDESTCTDGFQENAANEDIKTTVRGRIVQVAQLTSNALALINQLATSQG* 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g00071 197 FunFam Pectinesterase inhibitor 3 32 193 - -
Rops3g00071 197 NCBIfam pectinesterase inhibitor domain 7 192 IPR006501 GO:0004857
Rops3g00071 197 CDD PMEI-like_3 39 194 - -
Rops3g00071 197 SMART PMEI_2 32 188 IPR006501 GO:0004857
Rops3g00071 197 Pfam Plant invertase/pectin methylesterase inhibitor 36 188 IPR006501 GO:0004857
Rops3g00071 197 Gene3D Invertase/pectin methylesterase inhibitor family protein 32 194 IPR035513 -
Rops3g00071 197 PANTHER PECTINESTERASE INHIBITOR-LIKE 12 188 - -
Rops3g00071 197 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 36 192 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g00071 Rops-Chr3 907802 908779 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g00071 16 192 Carbohydrate Esterase AT3G14310 29.444 4.22e-23 94.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g00071 - - gmx:100305537 281.952
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops3g00071 3 907802 908779 Rops3g00071 3 907802 908779 ECH