Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g00070 ATGTCTTGCCATAATCTCTTTAGAGGACTTGTGTCCCTTCTTTTCATCTCCACCCTTGTTCATGCATCATCTGCACGCAACTCCACAGCCACAAATACTACCAATTCCCTTGAAGCCTACAAAAAGTTCATAAAAAATGAGTGCAATTCAACCACTTACCCAAATGTTTGCCACGAGTCTCTCTCCCCTTACGCATCAAAAATCCAAACAAACCATTTATTACTCACCAAAGTCTCCATTTATGTGGCTCTAAAAACAGCCAAAAGTGCATACGAGACATTGTCAGAGCTATCCAATTCCAAAGGGAACCTGACACATGCAGAAACGTTGGTCATTGCGGACTGCAGAGAGAATGTTGAGGACACGTTGGATCTACTTGAGCAATCTGCTGATGGGTTGGGACATTTGAAGGGTACCACTACTGATGATGAGAAGTTTCAATGGGATAACATAAAGACATGGATGAGTGCTGCCATAACAGATGAGGGAACGTGCACGGATGAGTTTGACGAAATGGAAGTGCGGTCTTCACTGAAGAAAAAGATCGAAGCTTATGTTAGTAATGCTGCTTGGAAGACTAGCAATGCCCTGTATTTCGTAAACAGGCTTACCTTCTAA 618 0.4272 MSCHNLFRGLVSLLFISTLVHASSARNSTATNTTNSLEAYKKFIKNECNSTTYPNVCHESLSPYASKIQTNHLLLTKVSIYVALKTAKSAYETLSELSNSKGNLTHAETLVIADCRENVEDTLDLLEQSADGLGHLKGTTTDDEKFQWDNIKTWMSAAITDEGTCTDEFDEMEVRSSLKKKIEAYVSNAAWKTSNALYFVNRLTF* 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g00070 205 Pfam Plant invertase/pectin methylesterase inhibitor 42 197 IPR006501 GO:0004857
Rops3g00070 205 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 41 203 IPR035513 -
Rops3g00070 205 PANTHER PECTINESTERASE INHIBITOR-LIKE 13 195 - -
Rops3g00070 205 SMART PMEI_2 39 199 IPR006501 GO:0004857
Rops3g00070 205 NCBIfam pectinesterase inhibitor domain 27 203 IPR006501 GO:0004857
Rops3g00070 205 CDD PMEI-like_3 48 204 - -
Rops3g00070 205 Gene3D Invertase/pectin methylesterase inhibitor family protein 39 204 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g00070 Rops-Chr3 895274 895891 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g00070 43 204 Carbohydrate Esterase AT1G53830 26.543 9.05e-13 64.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g00070 - - gmx:100527377 261.536
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops3g00070 3 895274 895891 Rops3g00070 3 895274 895891 ECH