Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Rops3g00044 | ATGGCCAACAGTCCCTGTCTCTTTCACTTTTTCCAGTTCTTGGCAATGCTGTTATTCACTTCATACTCTATTTTCCCGCCTTGTGTGTCTCTAACATTGGAAACCCAAGCTCTTCTTCAGTTCAAGAACCATTTGAAGGACTCATTGAATTACCTGGGTTCCTGGAGTGAATCAGATTCTCCATGTGAGTTCTATGGAATTAGATGTGATCCAGCTTCTGGGAAAGTCACAGAAATCTCACTGGACAACAAGTCCCTCTCTGGTGACATTTTCCCTTCACTCTCAGTTCTGCAGAGCCTGCTAGTTCTGTCACTACCATCCAATTTAATTTCTGGAAAGCTTCCATCAGAAATAAGTAATTGTACCAACCTCAGAGTCTTGAATCTTACAGGAAATCAGCTGGTTGGACCAATCCCAGACTTGTCCAGGCTGAGAAACCTGCAGGTTCTTGATCTTTCAGCAAACTACTTCTCTGGCAGCATCCCCAGTTGGGTGGGGAGTCTAACTGGACTAGTTTCACTGGGTCTTGGAGAAAATGAATACAGTGAGGGTGAGATTCCAGAGACTCTTGGAAATCTGAAGAACTTGACCTGGCTCTATCTTGGTGGTTCCCATTTGATAGGAGAGATTCCAGAATCATTATATGAAATGGAGGCATTGGAGACACTGGATATTTCAAGAAACAAGATCTCTGGCACACTCTCTAGATCAATTTCCAAGTTAAAAAATATTTACAAGATGGAGCTCTTCGCAAATAATTTGACAGGAGAAGTCCCAGCTGAGCTTGCAAACCTCACCAACCTGCAGGAGATTGACCTTTCTGCAAACAATATGTATGGTAGGTTGCCAGAGGAAATTGGTAATATGAAGAACTTGGTTGTTTTTCAACTATATGAAAACAACTTTTCTGGAGAAATTCCTGCTGGATTTGGGGACATGCAACATCTCATTGGGTTCTCAATTTATAGAAACGGCTTCATTGGGATGATTCCAGAAAATTTTGGCCGATTTTCGCCGCTTGTGAGTATTGACATATCAGAGAATCAATTTTCAGGTGATTTCCCAAAGTTCTTGTGTGAAAGCAGGAAGTTGAGATTTTTGCTTGCATTGCAGAACAATTTTTCTGGGAATTTCCCCGAGTCTTATGTTGCATGCAAATCTCTAGAGAGATTTAGGATTAATAGAAACCGCTTATCTGGGAAAATTCCACACGAGGTTTGGGCACTTCCATATGTCAAAATACTTGATTTGGCTTATAATGATTTCACTGGCGAGGTATCTTCAGAAATTAGGTTTTCTACTAGCTTGAGTCAGATAGTTTTGATAAATAACAGGTTTTCAGGTAAGCTCCCATCAGATCTTGGCAAGCTGGTGAACTTGGAGAAGCTTTACTTGAGCAACAATAATTTCTCTGGTGAAATACCACCTGAATTGGGATCTCTGAAGCAGTTATCCTCTTTGCATTTAGAAGAGAATTCATTAACTGGATCAGTACCCACAGAACTGGGTCATTGTGCAAGGCTGGTGGACTTAAATCTTGCTTGGAATTCTCTATCTGGAAATATTCCCCAGTCAGTTTCACTTATGAGCTCATTGAACTCTCTTAATATATCTGGAAACAAACTTACAGGTTCTATTCCAGATGATTTAGAGACAATGAAACTAAGCTCGGTGGATTTTTCTGAAAACCTGCTATCTGGAAGAATACCATCTGGTCTTTTTATTATTGGTGGAGAGAGAGCTTTTCTTGGAAACAAGGGGCTGTGTGTTGATGAAAACCTAAAACCTTCCATGAATTCTGATTTGAAGATTTGTGCCAAAAATCATGGTCAGACAAGGGTCTTTGCTTATAAATTTGTCTTGATCTTTTTCACTGCTTTTATCTTTGTTGTTATTTTAGCTGGGTTGGTGCTTTTGAGTTGTAGAAGCCTCAAGCATGGTGCAGAGAAAAACTTCCAAGGTCAAAAGGAAGCACATCAAAAATGGAAACTTGCATCTTTCCACCAAGTAGATATTGATGCTGATGAAATATGTAATTTGGATGAAGATAATTTAATTGGCAGCGGTGGTACAGGAAAGGTTTATCGAGTGGAGTTGAGGAAAAATGGTGCCATGGTGGCTGTAAAGCAACTAGAGAAAGGAGGTGTGAAGATTTTAGCTGCAGAGATGGATATTTTGGGGAAAATCAGGCATAGAAACATACTTAAACTTTATGCTTGTTTACTTAAAGGAGGATCCAACCTTTTAGTGTTTGAGTACATGCCAAATGGTAATCTTTTTCAAGCTCTTCACAGACAGATAAAAGATGGGAAGCCAGAATTGGATTGGAACCAGAGGTATAAGATTGCTCTGGGCGCTGCAAAAGGAATTGCCTATTTACACCATGACTGTTGTCCACCTATTATTCACAGAGATATTAAACCCAGCAACATTTTGCTTGATGAGGATTATGAGCCAAAAATTGCTGACTTCGGTATTGCAAGGTTTGCAGAAATTTCTGATAAGCAGTTGGGTTATAGCTGTCTTGCCGGCACACTTGGTTATATTGCACCAGAACTCGCTTATACAATTGAGATCACTGAAAAGAGTGATGTCTATAGCTTTGGGGTGGTGCTATTAGAGTTAGTGTGTGGCAGAGAACCCATTGAAGAGGAATATGGAGAAGCAAAGGACATTGTTTATTGGGTTTCAACTCATCTCAATGACCGTGAAAGTATTCTCAACATTCTTGATGATAGGGTGGCATTGGAATCTGCTGAAGATATGATAAAAGTCTTAAAGATTGCTATTAAGTGCACCACTAAGCTTCCATCTTTGCGCCCTACCATGAGAGAGGTTGTCAAGATGCTTATTGGTGCTGAACCTTGCACATTGAAATCTACAGACTGCGATCTTTACAAAGATGCAAAGGCATTTCTCTAG | 2922 | 0.4008 | MANSPCLFHFFQFLAMLLFTSYSIFPPCVSLTLETQALLQFKNHLKDSLNYLGSWSESDSPCEFYGIRCDPASGKVTEISLDNKSLSGDIFPSLSVLQSLLVLSLPSNLISGKLPSEISNCTNLRVLNLTGNQLVGPIPDLSRLRNLQVLDLSANYFSGSIPSWVGSLTGLVSLGLGENEYSEGEIPETLGNLKNLTWLYLGGSHLIGEIPESLYEMEALETLDISRNKISGTLSRSISKLKNIYKMELFANNLTGEVPAELANLTNLQEIDLSANNMYGRLPEEIGNMKNLVVFQLYENNFSGEIPAGFGDMQHLIGFSIYRNGFIGMIPENFGRFSPLVSIDISENQFSGDFPKFLCESRKLRFLLALQNNFSGNFPESYVACKSLERFRINRNRLSGKIPHEVWALPYVKILDLAYNDFTGEVSSEIRFSTSLSQIVLINNRFSGKLPSDLGKLVNLEKLYLSNNNFSGEIPPELGSLKQLSSLHLEENSLTGSVPTELGHCARLVDLNLAWNSLSGNIPQSVSLMSSLNSLNISGNKLTGSIPDDLETMKLSSVDFSENLLSGRIPSGLFIIGGERAFLGNKGLCVDENLKPSMNSDLKICAKNHGQTRVFAYKFVLIFFTAFIFVVILAGLVLLSCRSLKHGAEKNFQGQKEAHQKWKLASFHQVDIDADEICNLDEDNLIGSGGTGKVYRVELRKNGAMVAVKQLEKGGVKILAAEMDILGKIRHRNILKLYACLLKGGSNLLVFEYMPNGNLFQALHRQIKDGKPELDWNQRYKIALGAAKGIAYLHHDCCPPIIHRDIKPSNILLDEDYEPKIADFGIARFAEISDKQLGYSCLAGTLGYIAPELAYTIEITEKSDVYSFGVVLLELVCGREPIEEEYGEAKDIVYWVSTHLNDRESILNILDDRVALESAEDMIKVLKIAIKCTTKLPSLRPTMREVVKMLIGAEPCTLKSTDCDLYKDAKAFL* | 974 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Rops3g00044 | 973 | FunFam | Probable inactive receptor kinase RLK902 | 31 | 188 | - | - | |
Rops3g00044 | 973 | FunFam | Receptor-like protein kinase HSL1 | 295 | 598 | - | - | |
Rops3g00044 | 973 | FunFam | Leucine-rich receptor-like protein kinase family protein | 670 | 753 | - | - | |
Rops3g00044 | 973 | ProSitePatterns | Protein kinases ATP-binding region signature. | 686 | 709 | IPR017441 | GO:0005524 | |
Rops3g00044 | 973 | Pfam | Leucine rich repeat N-terminal domain | 34 | 70 | IPR013210 | - | |
Rops3g00044 | 973 | CDD | STKc_IRAK | 686 | 950 | - | - | |
Rops3g00044 | 973 | Pfam | Leucine Rich Repeat | 220 | 241 | IPR001611 | GO:0005515 | |
Rops3g00044 | 973 | Pfam | Leucine Rich Repeat | 459 | 481 | IPR001611 | GO:0005515 | |
Rops3g00044 | 973 | FunFam | Leucine-rich repeat receptor protein kinase EMS1 | 210 | 294 | - | - | |
Rops3g00044 | 973 | Gene3D | Phosphorylase Kinase; domain 1 | 650 | 753 | - | - | |
Rops3g00044 | 973 | ProSiteProfiles | Protein kinase domain profile. | 680 | 957 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Rops3g00044 | 973 | SUPERFAMILY | Protein kinase-like (PK-like) | 677 | 950 | IPR011009 | - | |
Rops3g00044 | 973 | SUPERFAMILY | L domain-like | 58 | 375 | - | - | |
Rops3g00044 | 973 | Pfam | Protein kinase domain | 682 | 948 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Rops3g00044 | 973 | FunFam | leucine-rich repeat receptor-like protein kinase TDR | 754 | 962 | - | - | |
Rops3g00044 | 973 | Gene3D | Transferase(Phosphotransferase) domain 1 | 754 | 963 | - | - | |
Rops3g00044 | 973 | Gene3D | Ribonuclease Inhibitor | 185 | 322 | IPR032675 | - | |
Rops3g00044 | 973 | ProSiteProfiles | Leucine-rich repeat profile. | 123 | 145 | IPR001611 | GO:0005515 | |
Rops3g00044 | 973 | Gene3D | Ribonuclease Inhibitor | 32 | 184 | IPR032675 | - | |
Rops3g00044 | 973 | Pfam | Leucine rich repeat | 145 | 206 | IPR001611 | GO:0005515 | |
Rops3g00044 | 973 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 801 | 813 | IPR008271 | GO:0004672|GO:0006468 | |
Rops3g00044 | 973 | PANTHER | LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED | 218 | 951 | - | - | |
Rops3g00044 | 973 | SMART | serkin_6 | 680 | 957 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Rops3g00044 | 973 | SUPERFAMILY | L domain-like | 283 | 573 | - | - | |
Rops3g00044 | 973 | Gene3D | Ribonuclease Inhibitor | 323 | 510 | IPR032675 | - | |
Rops3g00044 | 973 | Gene3D | Ribonuclease Inhibitor | 511 | 589 | IPR032675 | - | |
Rops3g00044 | 973 | Pfam | Leucine Rich repeat | 120 | 134 | IPR001611 | GO:0005515 | |
Rops3g00044 | 973 | SMART | LRR_typ_2 | 265 | 289 | IPR003591 | - | |
Rops3g00044 | 973 | SMART | LRR_typ_2 | 529 | 553 | IPR003591 | - | |
Rops3g00044 | 973 | SMART | LRR_typ_2 | 457 | 480 | IPR003591 | - | |
Rops3g00044 | 973 | SMART | LRR_typ_2 | 97 | 121 | IPR003591 | - | |
Rops3g00044 | 973 | SMART | LRR_typ_2 | 217 | 241 | IPR003591 | - | |
Rops3g00044 | 973 | SMART | LRR_typ_2 | 481 | 505 | IPR003591 | - | |
Rops3g00044 | 973 | SMART | LRR_typ_2 | 144 | 168 | IPR003591 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Rops3g00044 | Rops-Chr3 | 652371 | 657212 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Rops3g00044 | 24 | 962 | Receptor kinase-like Gene Family | AT1G72180 | 57.789 | 0.0 | 1063 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-XI-1 | Rops3g00044 | Pkinase | 4.9e-49 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Rops3g00044 | - | - | gmx:100789704 | 1627.84 |