Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Rops3g00043 | ATGGCTTTTCTCCTTAACCACTCCTTTTGCTACCTCTTGTACTTCCTTTCTTCTCTACCAATCATATATGCACTTTCAACAGTTTCCATTTCTGAAACTTCCAACCAAACATTTATCTGTGCCTTACAACATCCAAACCAACAAGGACAGTCAAACCTTAACTGTACTAGCTTTCCTCCTGGTGTTGGACTAGAAATGAATCCCAATGTTTCCTATTCTGAGATTGTGGGTGGCAATGGGTTTCTATGTGCATTAAGGCCACCATCTTCTTCTACTTCCATCATGGGCTGTTGGAGATTCTCTGCTAACGCTACTAATGTTCCCTATAAGCGTATCTACCGTGGACCCGTTATTGAAAGCATTGAAGGTGGGAATTCCCATGTTTGTGGTCTTGTAAGAGGGAATGATGGGGTTGACCTTGAGTGTTGGCAATGGTCTCACTTCAATTCAAGCATGGGCAGGAACATGTCAAGCATTGCAGTGGGGGAGGATTTTGTATGTGGCTTATCAGAAACTGGGAAAGTTACTTGCATTGGGAGTGACACTAGAGTTGTTGGGCATGAGCCTGGGCCTGATGGAAATTACTCTGTAGTTGCAGCTGGGTTCAGGCATGCTTGTGCTATCTCTCTTGATGGTAGCCTGGATTGTTGGGGGGACATGGTGGGTGAGAAACCACAAGGGAGGTTCATTTCTTTGGCGTTGGGAGAGAATCGAAGTTGCGCACTTGGGGATAATGGAATAGTTATTTGTTGGGGGTCGAATAATTTCAGCATGCCACAGAGATTGCAAGGCACTTTTTTTGAAGCAATTGCAGCAAAACGAAGTGTTTTCTGTGGAGTTGTGTCTTCTAATTATTCTTTGCTTTGTTGGGGTACTGAAATTGTTGAGTCAAATACCAAGGTGTTTGATAATGTCCTCCCAGGACCTTGTAGGAATGAATGTCCATGCGGGCCCTTGTCAGATTCTGCCAAACTCTGTAACCCACCGGCCATCATTTGCAAGCCTTGTCCACCAGCAGTCGAATCTCCTCCATTGGAACCATCATCACCCCAACCAGCATCAGAAAGTGGTTGGAGCAATAAAATGGTGGCATTTCTGGTGGTTGGATGTGTTGGTTGCAGTTCCTTGTTGTTAGTCTTGGCTTTCTTCCTTTACAAGCACTGCAAAGGCAGAGGATGCCGTGTCCATGACTCTGGCCGATTGGATGAGCCTGAGGGTGAACCAGAAGCTCCAGCTGTCCCTGCAGTTTTGGAGAAGCGTTTGAGCCATGTAATTAGCATTGGAAATGGGGGGAGCCATTTGGAGGAATTTTCCCTGCAAGTACTGCTCCAAGCCACTGACAATTTCTCTGAGGAGAATAAAATTGGAACAGGGAGCTTTGGTTCAGTGTATCATGCCACACTGGAATATGGGAAGGAAGTTGCTATAAAAAGAGCCGAAATCTCGTCCACTTCTGCATCCTATGCAGTTTTGGGTGGCACCAAAAGGCAAGAAGACAAAGACAATGCCTTTGTGAATGAGCTTGAATCTCTATCAAGACTCCACCACAAGAATCTAGTTCGGTTACTTGGTTTCTATGAAGACATGAATGAACGCATTTTGGTGTATGAGTATATGAACAATGGCAGCCTAAGTGATCATCTTCACAAGTTCCAAAGTTCTGCTCTCATGTCATGGGCAGTTCGCATAAAGGTAGCTCTAGATGCTGCCAGAGGCATAGAGTATCTACACCAATATGCCACTCCACCAATCATTCATCGTGACATTAAGTCATCAAACATATTATTGGATGCCAAGTGGACGGCCAAAGTGTCTGATTTTGGACTATCATTGATGGGTCCTGAAGATGAGGAGTCCCACCTTTCACTTCTAGCAGCTGGCACCGTTGGCTACATGGACCCTGAATACTATAGACTTCAGCTTTTGACCACAAAGAGTGACGTGTACAGCTTTGGAGTTGTTTTGCTAGAACTCCTATCTGGGCTAAAAGCCATCCATAAAAACGAGAATGGGGTGCCAAGAAATGTAGTAGATTTTGTGGTACCCTTCATTCTTCAAGATGAAATTCACAGGGTTTTGGACCCAAAAGTGCCACCCCCAACACCATTCGAGATAGAGGCCGTGGCGTTTGTGGGTTATTTGGCATCAGATTGTGTTCGTCTAGAAGGTCGAGATCGACCGACAATGAGTCATGTTGTAAATAACTTGGAAACGGCACTGGCTGCGTGTTTAGCCCAACCAATACTTTCAAGGTCCACCACTGCTTCTTCGGACTAG | 2277 | 0.4515 | MAFLLNHSFCYLLYFLSSLPIIYALSTVSISETSNQTFICALQHPNQQGQSNLNCTSFPPGVGLEMNPNVSYSEIVGGNGFLCALRPPSSSTSIMGCWRFSANATNVPYKRIYRGPVIESIEGGNSHVCGLVRGNDGVDLECWQWSHFNSSMGRNMSSIAVGEDFVCGLSETGKVTCIGSDTRVVGHEPGPDGNYSVVAAGFRHACAISLDGSLDCWGDMVGEKPQGRFISLALGENRSCALGDNGIVICWGSNNFSMPQRLQGTFFEAIAAKRSVFCGVVSSNYSLLCWGTEIVESNTKVFDNVLPGPCRNECPCGPLSDSAKLCNPPAIICKPCPPAVESPPLEPSSPQPASESGWSNKMVAFLVVGCVGCSSLLLVLAFFLYKHCKGRGCRVHDSGRLDEPEGEPEAPAVPAVLEKRLSHVISIGNGGSHLEEFSLQVLLQATDNFSEENKIGTGSFGSVYHATLEYGKEVAIKRAEISSTSASYAVLGGTKRQEDKDNAFVNELESLSRLHHKNLVRLLGFYEDMNERILVYEYMNNGSLSDHLHKFQSSALMSWAVRIKVALDAARGIEYLHQYATPPIIHRDIKSSNILLDAKWTAKVSDFGLSLMGPEDEESHLSLLAAGTVGYMDPEYYRLQLLTTKSDVYSFGVVLLELLSGLKAIHKNENGVPRNVVDFVVPFILQDEIHRVLDPKVPPPTPFEIEAVAFVGYLASDCVRLEGRDRPTMSHVVNNLETALAACLAQPILSRSTTASSD* | 759 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Rops3g00043 | 758 | CDD | STKc_IRAK | 455 | 737 | - | - | |
Rops3g00043 | 758 | ProSitePatterns | Protein kinases ATP-binding region signature. | 455 | 477 | IPR017441 | GO:0005524 | |
Rops3g00043 | 758 | SMART | serkin_6 | 449 | 740 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Rops3g00043 | 758 | Gene3D | Transferase(Phosphotransferase) domain 1 | 539 | 746 | - | - | |
Rops3g00043 | 758 | Gene3D | - | 69 | 305 | IPR009091 | - | |
Rops3g00043 | 758 | PANTHER | SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN CCR4 | 181 | 746 | IPR044815 | GO:0004674 | |
Rops3g00043 | 758 | Pfam | Regulator of chromosome condensation (RCC1) repeat | 198 | 219 | - | - | |
Rops3g00043 | 758 | Pfam | Regulator of chromosome condensation (RCC1) repeat | 230 | 256 | - | - | |
Rops3g00043 | 758 | SUPERFAMILY | Protein kinase-like (PK-like) | 430 | 736 | IPR011009 | - | |
Rops3g00043 | 758 | ProSiteProfiles | Protein kinase domain profile. | 449 | 749 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Rops3g00043 | 758 | Pfam | Protein kinase domain | 450 | 734 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Rops3g00043 | 758 | SUPERFAMILY | RCC1/BLIP-II | 109 | 293 | IPR009091 | - | |
Rops3g00043 | 758 | FunFam | Serine/threonine-protein kinase-like protein CCR4 | 539 | 754 | - | - | |
Rops3g00043 | 758 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 584 | 596 | IPR008271 | GO:0004672|GO:0006468 | |
Rops3g00043 | 758 | Gene3D | Phosphorylase Kinase; domain 1 | 426 | 538 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Rops3g00043 | Rops-Chr3 | 646496 | 649079 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Rops3g00043 | 23 | 754 | Receptor kinase-like Gene Family | AT5G47850 | 52.660 | 0.0 | 711 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_CR4L | Rops3g00043 | Pkinase | 3.5e-44 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Rops3g00043 | - | - | pvu:PHAVU_011G003100g | 1100.12 |