Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g00003 ATGGGAGAGTTAAGAATTTCATTACTAAACTTGACCTCTACTACAATTGCTGTTAGCACTGTGATTGTTACAGTGCTGGTATGGTGGATTTGGAGCGCATTAAACTGGGTGTGGCTCAGACCGAAGAGGATAGAAAGGCGTCTCAAGCAGCAGGGCCTCCAAGGCAATTCCTACCGCCCTCTGGTTGGAGACATCAGAGACATGGTTAAAATGATCAAAGAAGCCAAATCCCAACCCATGGATCCTCACTCCAACGACATTGCACCCCGTGTATTGCCTTACGTTGTCCACACCATCGCTAAATATGGGAAGAATTCATTTATGTGGCTTGGACCAACACCAAGGTTATTCGTCATGGATCCAGACAAAATCAAAGAAATCGCAAATAAGGTCTATGAATTTCAAAAGCCCGACACTAGTCCCCTTTTCAAGCTTCTAGCATCAGGCTTTGCCAATTATGATGGCGACAAGTGGGCTAAACACAGAAAGATCGTCAGTCCAGCATTCAATGTAGAGAAACTGAAGGTCTTGGTACCGTTATTTTGCCAGTGTTGCGATGATATGATCAGTAAATTGGAGAGTGTATTATCTTCGTCGAATGGGTCATGTGAGTTAGATGTGTGGCCTTTCGTCCAGAACGTTTCAAGCGACGTCCTCGCTCGTGCAGGCTTTGGAAGTAGCTATGAGGAAGGAAGAAAAGTGTTCGAACTTCAAAGGGAAATGCTTCAACATACCATGACACTTTTTAGATTTGCTTTCATTCCAGGTTACAGGTTTCTGCCGACATATACCAACAGGAGGATGAAAGCAATTGACAAAGAAATACGAGCATCACTTATGGGTATCATCAACCGAAGATTAAAAGCAATGAAAGCAGGGGAGCCTACTAACAATGACTTATTAGGCATACTCTTGGAATCGAATTACAAGGAATCTGAAAAAAATAATGGTGCTGGAGGAATGAGTTTAAGAGAAGTAGTCGAAGAAGTCAAGCTATTTTACCTGGCAGGGCAGGAAGCCAATGCAGAATTGCTGGTTTGGACTTTGTTATTATTAAGCAAGCATCCTGATTGGCAAGCAAAGGCAAGGGAGGAAGTTTTTAAAGTGTTCGGTAATGAAAAGCCAGATTATGATAAGCTAGGTCAACTTAAAATTGTCTCAATGATTCTACAGGAGAGTCTCAGATTATATCCCCCGGTTGTTATGTTTGCTCGATATCTTCGTAAAGATGCAAAACTTGGAGACCTTACAATTCCTGCAGGAGTGGAGCTTGTAGTACCTGTGTCAATGCTACACCAAGATAAGGAGTTTTGGGGTGATGATGCCAGGGAGTTCAAGCCAGAAAGATTCTCTGAAGGAGTCTCAAAGGCAACAAAAGGCAAAGTTTCTTATATGCCATTTGGATGGGGTCCTCGGCTCTGCATAGGACAAAACTTTGGCTTGTTAGAAGCAAAAATAGCTTTGTCCATGATCCTGCGACGTTTCTCCCTCGAGCTTTCCCCGTCCTATACTCATGCTCCTTCCTTTATTATTACTCTGCAGCCTGAGCGCGGGGCTCATATCATTTTACATAAACTGTAG 1581 0.4307 MGELRISLLNLTSTTIAVSTVIVTVLVWWIWSALNWVWLRPKRIERRLKQQGLQGNSYRPLVGDIRDMVKMIKEAKSQPMDPHSNDIAPRVLPYVVHTIAKYGKNSFMWLGPTPRLFVMDPDKIKEIANKVYEFQKPDTSPLFKLLASGFANYDGDKWAKHRKIVSPAFNVEKLKVLVPLFCQCCDDMISKLESVLSSSNGSCELDVWPFVQNVSSDVLARAGFGSSYEEGRKVFELQREMLQHTMTLFRFAFIPGYRFLPTYTNRRMKAIDKEIRASLMGIINRRLKAMKAGEPTNNDLLGILLESNYKESEKNNGAGGMSLREVVEEVKLFYLAGQEANAELLVWTLLLLSKHPDWQAKAREEVFKVFGNEKPDYDKLGQLKIVSMILQESLRLYPPVVMFARYLRKDAKLGDLTIPAGVELVVPVSMLHQDKEFWGDDAREFKPERFSEGVSKATKGKVSYMPFGWGPRLCIGQNFGLLEAKIALSMILRRFSLELSPSYTHAPSFIITLQPERGAHIILHKL* 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g00003 526 Pfam Cytochrome P450 99 510 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops3g00003 526 CDD CYP72 92 522 - -
Rops3g00003 526 PRINTS P450 superfamily signature 474 485 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops3g00003 526 PRINTS P450 superfamily signature 388 399 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops3g00003 526 PRINTS P450 superfamily signature 336 353 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops3g00003 526 PRINTS P450 superfamily signature 465 474 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops3g00003 526 FunFam Cytochrome P450 734A1 38 526 - -
Rops3g00003 526 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 467 476 IPR017972 GO:0005506|GO:0016705
Rops3g00003 526 SUPERFAMILY Cytochrome P450 90 524 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops3g00003 526 PRINTS E-class P450 group I signature 474 497 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops3g00003 526 PRINTS E-class P450 group I signature 99 118 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops3g00003 526 PRINTS E-class P450 group I signature 214 232 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops3g00003 526 PRINTS E-class P450 group I signature 345 371 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops3g00003 526 PRINTS E-class P450 group I signature 464 474 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops3g00003 526 PANTHER CYTOCHROME P450 FAMILY MEMBER 28 517 - -
Rops3g00003 526 Gene3D Cytochrome P450 37 526 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g00003 Rops-Chr3 84703 87342 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g00003 2 526 Cytochrome P450 AT3G14690 52.952 0.0 618
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g00003 - K24179 gmx:100801959 934.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops3g00003 3 84703 87342 Rops3g00003 3 84703 87342 ECH