Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g05397 ATGCAGCAAGGTGATCAAACGGTTCTGAGCTTGAGGCCTGGTGGTGGTAGAGGAAGCAGGCTCCTCGCTCCTCGATTCGATTCCTCTTCATCTACTTCTTCTGCTATTGGCTCTGATCTTCCTCTCTTGCGTCCCCATGGCGCCGCTGCTACTCCCTTCTCTATCAAGGCTGGAGATTCACGATTTGAGGGTCGTGAGCGTGTGCGGTATACCAGAGATCAGCTCTTACAACTCAGAGAGGTGGTTGAGACCTTTGATGATATTTTAAAAATCAAACAAGATATTGAAGCTGAACTTTTTGGTGAAGATCAAAGTTGGGGCCGCTCAGAAAACAATCCCCAGCATCAAATTCAAAATCGATATTCTGAGCCAGATAACCGTGACTGGCGTGGCCGATCTGGGCAACTTCCTGCTAATGCAGACGAGAGGTCTTGGGATAATCTCAAGGAGAATAGAGAATTTGGATATACTAGTCAGGTTAATCGTCAAGACCAACTAAATTCTCAGTTTGCAAGGGCACAAATCTCTTCTAACCAAGGGGGAGGACCTACTCCTACTCTAGTCAAGGCTGAGGTACCATGGTCAGCTAGAAGGGGAAGTCTCTCTGAAAAAGATCGTGTCTTGAAGACTGTTAAAGGAATACTGAATAAGTTGACTCCTGAGAAATTTGATCTCCTGAAGGGTCAGTTGATTGATGCTGGCATTACATCAGCTGACATATTGAAGGGAGTCATTTCACTGATATTTGATAAGGCAGTGTTAGAACCAACATTTTGCCCCATGTATGCTCAGCTGTGTTCTGATCTTAATGAAAAGCTGCCTCCTTTCCCATCTGAAGAACCTGGTGGGAAAGAAATAACTTTCAAGCGAGTACTCTTGAATATTTGCCAGGAGGCTTTTGAAGGTGCAGATAAACTGAGGGAAGAATTAAGGCAGATGACTGCCCCTGAGCAGGAGATGGAGCGAAATGACAAGGAAAGGCTTGTCAAGATTCGTACCCTTGGAAACATCCGTTTAATTGGTGAGCTGTTGAAGCAAAAATGGTTCCTGAAAAGATTGTCCATCACATTGTCCAGGAGCTTTTAG 1086 0.4494 MQQGDQTVLSLRPGGGRGSRLLAPRFDSSSSTSSAIGSDLPLLRPHGAAATPFSIKAGDSRFEGRERVRYTRDQLLQLREVVETFDDILKIKQDIEAELFGEDQSWGRSENNPQHQIQNRYSEPDNRDWRGRSGQLPANADERSWDNLKENREFGYTSQVNRQDQLNSQFARAQISSNQGGGPTPTLVKAEVPWSARRGSLSEKDRVLKTVKGILNKLTPEKFDLLKGQLIDAGITSADILKGVISLIFDKAVLEPTFCPMYAQLCSDLNEKLPPFPSEEPGGKEITFKRVLLNICQEAFEGADKLREELRQMTAPEQEMERNDKERLVKIRTLGNIRLIGELLKQKWFLKRLSITLSRSF* 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g05397 361 SUPERFAMILY ARM repeat 202 349 IPR016024 -
Rops2g05397 361 MobiDBLite consensus disorder prediction 105 120 - -
Rops2g05397 361 MobiDBLite consensus disorder prediction 104 142 - -
Rops2g05397 361 Gene3D - 199 357 - -
Rops2g05397 361 MobiDBLite consensus disorder prediction 1 39 - -
Rops2g05397 361 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA 51 347 IPR045208 GO:0003743
Rops2g05397 361 SMART if4_15 208 361 IPR003890 GO:0003723|GO:0005515
Rops2g05397 361 MobiDBLite consensus disorder prediction 24 38 - -
Rops2g05397 361 Pfam MIF4G domain 208 347 IPR003890 GO:0003723|GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g05397 Rops-Chr2 96034630 96040538 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g05397 1 353 Eukaryotic Initiation Factors Gene Family AT5G57870 69.188 1.18e-160 467
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g05397 K03260 - gmx:100781275 608.986