Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g05396 ATGAGGTTCTTGGTTCGTGATATCTTAGATTTGCGTGCTAATAACTGGATTCCAAGACGTGAAGAGGTGAAAGCCAAAACCATCACTGAAATTCATTCAGAGGCAGAAAAAAATCTTGGATTGCGACCAGGTGCTACTGCAAGTATGAGAAATACCCGTGGTGTTGTTTCTGGTGTTCAAGGAAATACCAGCCCTGGGGGCTTCCCCATTGCCCGACCTGGTACAGGAGGTTTAATGCCCGGGATGCCAGGGACCAGGAAGATGCCTGGGATGCCGGGAATTGATAATGACAACTGGGAGATGCCTAAGACTAGATCGATGCCAAGAGGAGACTTGTCAGGCACACAAACTGGAGGCCGTGGCCAGTCTCCTTTCGTTTCCAAGTCATCAACCCTGAACTCGAAGTTTCTACCTCAAGGTAGTGGTGGTCTTATAAGTGGGAGAAGTAGTGCCCTGGTGCATGGAGGTGGTGCACCTTCTGCTCGTCCATCAAACTTTGGTGTAGGTACTGAGCCGGCACCTCAAATCCCGTCACCTGTTAAAGCTGTTTCTGCCGCATCTTCTGAGAAGCCACAGGCTCCAGCTGCAAAATTGAATACTGCTGATCTTCACCGCAAAACTGTCTCTCTCCTGGAAGAGTATTTCAGTGTCCGGCTTTTGGATGAGGCATTACAGTGTGTGGAGGAACTAAAATCTCCAGCTTATCACCCTGAGTTTGTCAAGGAAGCCATCTCCCTTGCACTAGATAAAAGTCCACCATGCATTGAACCTGTTGCCAATCTTCTTGAGTATCTGTTTATTAAGAAGATTCTTTCAGCTAGAGACATAGGGACTGGATGTTTGTTATTTGGTTCTCTGCTGGATGATATTGGCATAGATTTACCTAAAGCACCAAATAATTTTGGTGAGATAATAGGGAAACTAATTTTGGCTGGGGGTTTGGATTTTAAGGTGGTGAGAGAGATCCTTAAGAAGGTGGATGATGACCGGTTCCAGAAAGTAGTATTCGACTCTGCAGTGCAGGTAATTAAATCTGCATCGGGGCAAGCTGTGTTGGATTCACAAGCATCTGATATTGAGGCCTGTCGGAGTGTGTTCAAGTGA 1104 0.4647 MRFLVRDILDLRANNWIPRREEVKAKTITEIHSEAEKNLGLRPGATASMRNTRGVVSGVQGNTSPGGFPIARPGTGGLMPGMPGTRKMPGMPGIDNDNWEMPKTRSMPRGDLSGTQTGGRGQSPFVSKSSTLNSKFLPQGSGGLISGRSSALVHGGGAPSARPSNFGVGTEPAPQIPSPVKAVSAASSEKPQAPAAKLNTADLHRKTVSLLEEYFSVRLLDEALQCVEELKSPAYHPEFVKEAISLALDKSPPCIEPVANLLEYLFIKKILSARDIGTGCLLFGSLLDDIGIDLPKAPNNFGEIIGKLILAGGLDFKVVREILKKVDDDRFQKVVFDSAVQVIKSASGQAVLDSQASDIEACRSVFK* 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g05396 367 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA 2 352 IPR045208 GO:0003743
Rops2g05396 367 Gene3D - 196 362 - -
Rops2g05396 367 Pfam MA3 domain 204 315 IPR003891 -
Rops2g05396 367 MobiDBLite consensus disorder prediction 103 133 - -
Rops2g05396 367 ProSiteProfiles MI domain profile. 202 324 IPR003891 -
Rops2g05396 367 MobiDBLite consensus disorder prediction 109 133 - -
Rops2g05396 367 SMART ma3_7 203 315 IPR003891 -
Rops2g05396 367 FunFam Eukaryotic translation initiation factor isoform 4G-2 196 357 - -
Rops2g05396 367 SUPERFAMILY ARM repeat 198 353 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g05396 Rops-Chr2 96034630 96036860 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g05396 1 365 Eukaryotic Initiation Factors Gene Family AT5G57870 61.853 2.28e-151 444
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g05396 K03260 - gmx:100781275 611.298