Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g05387 ATGGCTTCTTCATTGTTGATGATTTTGTCAATGTGGCTGCTACTTTCCTGCTCCGAAGGCCGAGAATATCTGGTTGGAGGCAACCAAAGTTCATGGAAGGTTCCACTTCCATCACCAGATTCACTCAGCCAGTGGGCTCAGATTTTTGAATACGATAACAGAAGGGAATCGGTGCACGTAGTGGATGAGGAGGATTATTCAAAGTGCAAAACGAAGGGGGAACAACACGTGGTGTTCAATGACGGCAATACCAAGGTGGTGTTCAACAAATCAGGACCCCTTCACTTTATCACTGGAACTCGTGCTCATTGCCACATGGGCTTAAAGGTCGCGATCGTTGTCATGTCGACAAACACAAACACAGCCTCTCCTTCCCCTCACCCTCACCTATTCCACCTGCTAATCAAGCTTTTGCTCCTCCCGATTCAGGTACTGGATTCATCATCTGCTTATTTCTCATCATGA 465 0.4688 MASSLLMILSMWLLLSCSEGREYLVGGNQSSWKVPLPSPDSLSQWAQIFEYDNRRESVHVVDEEDYSKCKTKGEQHVVFNDGNTKVVFNKSGPLHFITGTRAHCHMGLKVAIVVMSTNTNTASPSPHPHLFHLLIKLLLLPIQVLDSSSAYFSS* 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g05387 154 ProSiteProfiles Phytocyanin domain profile. 21 116 IPR003245 GO:0009055
Rops2g05387 154 PANTHER BLUE COPPER PROTEIN 22 116 IPR039391 GO:0009055
Rops2g05387 154 Gene3D - 21 126 IPR008972 -
Rops2g05387 154 Pfam Plastocyanin-like domain 48 107 IPR003245 GO:0009055
Rops2g05387 154 SUPERFAMILY Cupredoxins 20 117 IPR008972 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g05387 1 131 Phytocyanin Superfamily AT4G31840 34.483 3.37e-25 93.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g05387 - - gmx:100784860 143.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g05387 2 95954173 95954773 Rops2g05387 2 95954173 95954773 ECH