Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g05381 ATGGCTCTCCTCAACTTGCTTGTTCTCCTTCTTCTCTTCTTTCTCTCCCGTGAAGCTCTCTGTTTGGCTTCCGAGCCTCGCAACCCCGAAGTGGATGCTTTGATGAGTATAAAGGAAGCTCTGAATGATCCACACGGTGTGTTGACCAACTGGGATGAATACTCGGTTGACCCTTGTAGTTGGACCTTGATCACTTGCTCTTCTGATTATCTTGTTATTGGCCTGGGAGCTCCCAGTCAATCTCTCTCTGGAACTTTGTCTTCAGCTATTGGCAATCTCACAAATATTCGACAAGTGTTACTGCAGAACAACAATATCTCAGGCCAAATCCCACCGGAACTTGGAAACCTTCCCAAGCTTCAGACTTTAGATCTTTCCAATAACCGATTCTCTGGCTTGATTCCACCTTCTCTGAGTCAATTGAATAATCTCCACTACCTGAGACTCAACAACAATAGCTTGTCTGGACCCTTTCCCGTGTCACTGGCCAAAATCCCAAAGCTTGCTTTCTTGGACTTGTCTTTTAACAATCTCAGTGGTCCACTGCCCAAGTTTCCAGCCAGGTCATTCAATATCGTGGGGAACCCGTTAGTTTGTGGAAGCAGTTCTACTGAAGGTTGCTCTGGATCAGCAACCCTCATGCCCGTTTCTTTCTCTCAAGCATCATCAAATGGAAAACACACGTACAGAAAAATAGCAATTGCACTTGGGGTCAGCTTTAGTTGTATTTCTCTCATGGTCCTGTTTTTTGGGCTCTTTTGGTATAGAAAGAAACGACAGCATGGAGCCATCTTGTATATCAGTGATTACAAGGAAGAGGGAGTTGTTAGGTTGGGAAATCTGAAAAATTTCACTTTCAGAGAGCTCCAACATGCTACAGATAATTTCAGCTCCAAGAATATACTTGGTGCTGGAGGGTTTGGCAATGTTTATAGGGGGAAGCTTGGAGATGGCACAATGGTGGCAGTGAAAAGGCGGAAAGATGTAACCGGTAGTGCTGGAGAATCACAGTTCCAAACAGAATTGGAGATGATCAGCTTGGCAGTCCACCGCAATTTGCTTCGCTTAATTGGATATTGTGCTACTCCTAATGAAAAACTTCTGGTTTATCCTTTTATGTCTAATGGCAGTGTGGCCTCCAGGCTTAGAGGCAAACCAGCTTTAGATTGGAACACAAGAAAGAGGATAGCAATTGGAGCTGCCAGAGGCCTTCTGTATCTGCATGAGCAATGTGATCCAAAGATAATACACAGAGATGTAAAAGCCGCTAATGTGCTTCTGGATGACTATTGTGAAGCCATTGTTGGTGATTTTGGACTTGCAAAGCTCCTTGATCATGCTGATTCCCATGTCACCACTGCTGTCCGTGGCACTGTCGGGCACATTGCACCAGAGTACCTCTCCACTGGCCAATCATCTGAGAAAACTGATGTATTTGGATTCGGCATTCTCTTGTTAGAGCTCATTACTGGAATGACAGCTCTCGAGTTAGGGAAAACTGTGAATCAGAAAGGTGCTATGCTGGAATGGGTTAGGAAAATACAGCGTGAAAAGAAGGTTGCAGAGTTGGTGGACAAAGAGCTAGGGAGCGACTATGATAGAATAGAGGTGGGGGAGATGCTACAAGTAGCTTTACTGTGCACTCAATATTTGACAGCCTACCGTCCAAAAATGTCTGAGGTGGTCCGAATGCTTGAAGGTGATGGCCTCGCTGAGAAGTGGGCATCATCCCATAATTATGGTAGTCATGGCATGAACCCTAGTCACAGCAACAGTGGCAATAGTTCATCCCGCCCTACCATTGCTCCAAAACATGATGACAATGTTCATGATCGTTCCAGCATGTTTGGCATGACAATAGATGATGATGATGAACAGTCTTTGGATTCCTATGCCATGGAACTCTCCGGTCCTAGATAA 1920 0.45 MALLNLLVLLLLFFLSREALCLASEPRNPEVDALMSIKEALNDPHGVLTNWDEYSVDPCSWTLITCSSDYLVIGLGAPSQSLSGTLSSAIGNLTNIRQVLLQNNNISGQIPPELGNLPKLQTLDLSNNRFSGLIPPSLSQLNNLHYLRLNNNSLSGPFPVSLAKIPKLAFLDLSFNNLSGPLPKFPARSFNIVGNPLVCGSSSTEGCSGSATLMPVSFSQASSNGKHTYRKIAIALGVSFSCISLMVLFFGLFWYRKKRQHGAILYISDYKEEGVVRLGNLKNFTFRELQHATDNFSSKNILGAGGFGNVYRGKLGDGTMVAVKRRKDVTGSAGESQFQTELEMISLAVHRNLLRLIGYCATPNEKLLVYPFMSNGSVASRLRGKPALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDYCEAIVGDFGLAKLLDHADSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMTALELGKTVNQKGAMLEWVRKIQREKKVAELVDKELGSDYDRIEVGEMLQVALLCTQYLTAYRPKMSEVVRMLEGDGLAEKWASSHNYGSHGMNPSHSNSGNSSSRPTIAPKHDDNVHDRSSMFGMTIDDDDEQSLDSYAMELSGPR* 640
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g05381 639 Pfam Protein tyrosine and serine/threonine kinase 299 565 IPR001245 GO:0004672|GO:0006468
Rops2g05381 639 MobiDBLite consensus disorder prediction 581 602 - -
Rops2g05381 639 ProSiteProfiles Leucine-rich repeat profile. 119 142 IPR001611 GO:0005515
Rops2g05381 639 Gene3D Ribonuclease Inhibitor 27 209 IPR032675 -
Rops2g05381 639 SUPERFAMILY Protein kinase-like (PK-like) 279 566 IPR011009 -
Rops2g05381 639 ProSitePatterns Protein kinases ATP-binding region signature. 302 324 IPR017441 GO:0005524
Rops2g05381 639 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 5 575 - -
Rops2g05381 639 PRINTS Leucine-rich repeat signature 120 133 - -
Rops2g05381 639 PRINTS Leucine-rich repeat signature 165 178 - -
Rops2g05381 639 FunFam Somatic embryogenesis receptor-like kinase 1 373 584 - -
Rops2g05381 639 SUPERFAMILY L domain-like 28 193 - -
Rops2g05381 639 FunFam Putative LRR receptor-like serine/threonine-protein kinase 27 209 - -
Rops2g05381 639 Pfam Leucine rich repeat 118 178 IPR001611 GO:0005515
Rops2g05381 639 Gene3D Phosphorylase Kinase; domain 1 266 372 - -
Rops2g05381 639 ProSitePatterns Serine/Threonine protein kinases active-site signature. 415 427 IPR008271 GO:0004672|GO:0006468
Rops2g05381 639 MobiDBLite consensus disorder prediction 603 619 - -
Rops2g05381 639 Pfam Leucine rich repeat N-terminal domain 28 67 IPR013210 -
Rops2g05381 639 Gene3D Transferase(Phosphotransferase) domain 1 373 582 - -
Rops2g05381 639 SMART serkin_6 296 551 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops2g05381 639 ProSiteProfiles Protein kinase domain profile. 296 551 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops2g05381 639 MobiDBLite consensus disorder prediction 581 639 - -
Rops2g05381 639 FunFam Somatic embryogenesis receptor kinase 1 266 372 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g05381 Rops-Chr2 95813237 95817495 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g05381 7 511 Receptor kinase-like Gene Family AT2G23950 74.851 0.0 778
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Rops2g05381 Pkinase 1.9e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g05381 - - gmx:100797186 1082.4