Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g05367 ATGGGTGGTGGTTTAGATGGCCATCTTACTCTAATAATGGCTATGATTGGGTTACAAATAAATTATGCAGTGATTGCCATCTTCACAAGAGCTGCTTTCTTAGACGGATTGAGTCCCACGGTCTTTGTAGTATACAGGCATGGTATAGCCACTTTGGCATTAGCGCCTTTGATTTTTACCCCTAAGAGGAGACAATCTATTAAGATTTCACTTAGATTAAGGAGCTTCTCTTTGATGCTTGTGACCTCTCTTATTGGAGTTACAGCAAATCAGAATGCATATTTCAAAGGTTTATATTACGCATCCTCTACAGCAGCTACTGCATTGGGTAATCTGATACCCGCGTTAACTTTTGTAATTGCAACAATTTTTGGATTTGAGAAAATTGATCTACGAAGCTTAAGAAGCATCGCCAAGATATTAGGGACAGTTTGTTGCGTCAGTGCAGCCTTAACCATGGCTTTGCTCAAAGGACACAAGCTGTTACACACAGAGTTCCTTCCTTCTAAACATCTCATTGCCAGTGGAAGTGAGAATTGGCTGCTGGGTTGTCTATTGCTCTTAGCCAGTAGTGTTTTATGGTCATGTTGGATGATCATGCAGGTACCAATTTCTTCATACTGCCCAGATCATTTATTGTCAACCTTTTGGATGTGTCTCTTTGCAACAATACAGTCAGCCATATTTGCACTGCTCTTTGAGCAGGATCTTCAAGCATGGATTTTACGTTCACCTCTACAACTTTCATGCTGTTTATATGCAGGAATCGGAATTGCGGTTAGCTTCTTCGCTCAATCCTGGTGCATCTCAGTAAGAGGTCCCCTATATTGTGCATTGTTCAACCCTCTTGCAATGGTCATCACAGCTCTGATAGCTACTACATTCCTAAAGGAAGAGCTATACGTTGGAAGTTTGATAGGAGCTGTTGGAGTGATTGCTGGTTTATATATTGTGCTATGGGGTAAAGCCAAAGACTTTGATGGCATTAAACAAGAGGCACCACAATCAAACATGCAGGATGATAATATAAGTAATAGGGTAGATTTGGAAGAACCACTTCTATCAGAGAAGTCAGAACATGTAGCAGAGGGCAAGATGGAGCCCTGA 1107 0.4119 MGGGLDGHLTLIMAMIGLQINYAVIAIFTRAAFLDGLSPTVFVVYRHGIATLALAPLIFTPKRRQSIKISLRLRSFSLMLVTSLIGVTANQNAYFKGLYYASSTAATALGNLIPALTFVIATIFGFEKIDLRSLRSIAKILGTVCCVSAALTMALLKGHKLLHTEFLPSKHLIASGSENWLLGCLLLLASSVLWSCWMIMQVPISSYCPDHLLSTFWMCLFATIQSAIFALLFEQDLQAWILRSPLQLSCCLYAGIGIAVSFFAQSWCISVRGPLYCALFNPLAMVITALIATTFLKEELYVGSLIGAVGVIAGLYIVLWGKAKDFDGIKQEAPQSNMQDDNISNRVDLEEPLLSEKSEHVAEGKMEP* 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g05367 368 PANTHER WAT1-RELATED PROTEIN 12 325 IPR030184 GO:0016020|GO:0022857
Rops2g05367 368 Pfam EamA-like transporter family 182 319 IPR000620 GO:0016020
Rops2g05367 368 Pfam EamA-like transporter family 12 147 IPR000620 GO:0016020
Rops2g05367 368 SUPERFAMILY Multidrug resistance efflux transporter EmrE 217 323 - -
Rops2g05367 368 SUPERFAMILY Multidrug resistance efflux transporter EmrE 45 147 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g05367 Rops-Chr2 95655524 95657773 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g05367 12 356 Nodulin-like Gene Family AT4G30420 47.368 6.53e-112 330
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g05367 - - gmx:100817369 539.265