Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g05366 ATGGGTGGTTTAGATGGCCATCTTCCTGTGATGGGTATGATAGGTTTACAATTTCATTATGCACTGCTTGCCATCTTCACAAGAGCTGCTTTGTTAGATGGATTGAGTCCCACGGTCTTTGTAGTATACAGGCAAGGCATAGCCACTTTGGCTTTGGCGCCTTTGCTTTTAACCCCTAAGAGGAGACAATCTTTAAAGGTTTCACTGAAATTAAGGAGCTTCTCTTTGATGTTTGTGACCTCTCTTATTGGAGTTACAGCAAATCAAAATGCATATTTTAAAGGTTTATATTATTCATCCTCTACAGCAGCTACTGCGATGAGTAATCTGATACCCGCATTAACTTTTGCAATGGCAGCAATTTTTGGATTTGAGAAAATTGATCTACGAAGCTTAAGAAGCATCGCCAAAATATTAGGGACAGTGTGTTGCGTCAGTGGAGCCTTAACCATGGCCTTGCTCAAAGGACCTAAGCTGTTACACATGGAGTTCCTTCCTTCTAAATCTCTCACTGCCAGTGGAAGTGAGGACTGGCTACTGGGTTGTCTATTGCTCTTAGCAAGTAGTCTTTTTTGGTCATGTTGGATGATCATGCAGGTACCAATTTCTTCATGCTGCCCAGACCATTTATTGTCAACCTTTTGGATGTGTCTCTTTGCAACAATACAGTCAGCTATATTTGCACTGCTATGTGAGAAGGATCTTCAAGCATGGATTTTACATTCACCTCTACAACTTTCATGCTGTTTATATGCAGGAATCGGAATTGCGGTTAGCTTCTTCGTTCAAACCTGGAGCATCTCAGAAAGAGGTCCCCTATACTGTGCAATGTTCAACCCTCTAGCAACTGTCATCACTGCTTTGATATCTGCTACATTCCTAAAGGAAGAGCTATACGTTGGAAGTTTGATAGGGGCTGTTGGAGTGATCGGGGGTTTATATATTGTGCTATGGGGTAAAGCCAAAGACTTTAATGGGATTAAACAAGAGGCACCACAATCAAACATACAGGATGATGATATACATAGTGGGAGAGATTTGGAAGAACCGCTTCTATCAGATAAGTCAGAAAATGTAGCACAGTGCAAGATGGAGCCCTGA 1101 0.4169 MGGLDGHLPVMGMIGLQFHYALLAIFTRAALLDGLSPTVFVVYRQGIATLALAPLLLTPKRRQSLKVSLKLRSFSLMFVTSLIGVTANQNAYFKGLYYSSSTAATAMSNLIPALTFAMAAIFGFEKIDLRSLRSIAKILGTVCCVSGALTMALLKGPKLLHMEFLPSKSLTASGSEDWLLGCLLLLASSLFWSCWMIMQVPISSCCPDHLLSTFWMCLFATIQSAIFALLCEKDLQAWILHSPLQLSCCLYAGIGIAVSFFVQTWSISERGPLYCAMFNPLATVITALISATFLKEELYVGSLIGAVGVIGGLYIVLWGKAKDFNGIKQEAPQSNIQDDDIHSGRDLEEPLLSDKSENVAQCKMEP* 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g05366 366 Pfam EamA-like transporter family 180 317 IPR000620 GO:0016020
Rops2g05366 366 Pfam EamA-like transporter family 10 145 IPR000620 GO:0016020
Rops2g05366 366 SUPERFAMILY Multidrug resistance efflux transporter EmrE 43 150 - -
Rops2g05366 366 PANTHER WAT1-RELATED PROTEIN 8 323 IPR030184 GO:0016020|GO:0022857
Rops2g05366 366 SUPERFAMILY Multidrug resistance efflux transporter EmrE 215 321 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g05366 Rops-Chr2 95624272 95626374 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g05366 1 365 Nodulin-like Gene Family AT4G30420 47.507 3.57e-118 345
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g05366 - - gmx:100817369 537.724