Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g05355 ATGGGCCTGAGTTTTGTACAAGTTAAAGGAGATACCTTTCTGCCTCCAACAGAACAGCCACCATATCTTCTTTCTCAGCCAACCCCACCTTTTCAACCCACTGTTCGATCTGATAGTTTCAGTTTGAACGACAAGACCTTGAAGGATAGTCCAAGCATACTTCTCATCATTATAATTTTGGCCATTGTTTTCTTCATTTCTGGTTTGCTACACCTCCTAGTAAGATTCCTTTGGAGACCTCAAAGTAGAGAACCTGATGATTTGGACAATGTCACTGCTCTTCAAGGCCAATTGCAGCAACTCTTTCACCTCCATGATGCTGGGGTTGACCAATCCTTCATTGACACCCTCCCTGTGTTCCTTTACAAAGCCATCATAGGATTGAAGAACCCTTTTGATTGTGCTGTTTGTTTGTGTGAATTTGAACCAGATGACAAGCTTAGGTTGTTGCCAAAATGTAGCCATGCTTTTCACATGGAGTGTATTGATACCTGGCTTTTGTCTCACTCTACTTGTCCTCTTTGTAGAGCAAGCTTGCTCCCTGATTTCTCCACAAACAACAGCTTTTCCCCTTTTGTTCTTGTTCTAGAATCTGGGAGTGACACTTCAAGGGAGATTGTTCCTGAAAGAGAGGCTGCTGTTGGAAGAACTAGTTCGGTTTTAACAACAAATTCTCGTCTTGGTTGTCGTGGAGATAGTGAATATGGATCAACCCGTATTGATTTACCACAAAAATCGGGTGATTTAGTTTTTTCAAGTGAGAATCCTGATCCAGCTGTAGCAGGTGATGGTGCGGAAAAAGTGGTCACTGTTAAGCTTGGAAAGTTCAGGAACGTGGATGGGGATGGTGGGGAAGGAAGTAGCAGCACCAACAATGTAGATGCTAGAAGGTGCTTTTCTATGGGGTCATTTGCTTATGTTTTGGATGAGAGTTCCTCATTGCAGGTACCTATAAGAACCCCAATGAAGCAGCAATCAAGTAAGAAAAAGTCTGTTTTGCCTTTGACCCCAGGACACAGGCCTGCAATGTCAGAATGTGACTGTGAATCCAGAAGAGATTTCAAATTTGCAGGCTTTGATGCAACTAGAGTTGAGGACTTTACTGGGACTACAGCAAGAAGTACTTGTAACGAAAGTGGGGCTGCTATTGGAAGGAACAAGAAGGAGAGTTTTTCTATTTCAAAGATTTGGCTAAGGGGAAAGAAGGATAAGCCAAATGCAGTGGCAGATTCATCCAGAAGGGCTGTTTCATTCAGGTTCCCAGCACAGCATAATGTTGTTACTACAGATGATTTGAAGGCCAAGAATGGCAAGTTTGACACCAGGAGTACTATTTCTGAGATGGATATTGGAAAATGGGAAAATGGAGGAGGAAGTGAGTTTGGCTATGATGAGGAAAACCAAAGCTGCTATAGTATGGATTCTCAAGCTAGGGCACCTTCTTTTGCTAGAAGGACTTTGCTTTGGCTCACTGGAAGACAGAATAAGGTTGTTCATTCATTCTCTGCTTCCAACCTCTAG 1521 0.428 MGLSFVQVKGDTFLPPTEQPPYLLSQPTPPFQPTVRSDSFSLNDKTLKDSPSILLIIIILAIVFFISGLLHLLVRFLWRPQSREPDDLDNVTALQGQLQQLFHLHDAGVDQSFIDTLPVFLYKAIIGLKNPFDCAVCLCEFEPDDKLRLLPKCSHAFHMECIDTWLLSHSTCPLCRASLLPDFSTNNSFSPFVLVLESGSDTSREIVPEREAAVGRTSSVLTTNSRLGCRGDSEYGSTRIDLPQKSGDLVFSSENPDPAVAGDGAEKVVTVKLGKFRNVDGDGGEGSSSTNNVDARRCFSMGSFAYVLDESSSLQVPIRTPMKQQSSKKKSVLPLTPGHRPAMSECDCESRRDFKFAGFDATRVEDFTGTTARSTCNESGAAIGRNKKESFSISKIWLRGKKDKPNAVADSSRRAVSFRFPAQHNVVTTDDLKAKNGKFDTRSTISEMDIGKWENGGGSEFGYDEENQSCYSMDSQARAPSFARRTLLWLTGRQNKVVHSFSASNL* 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g05355 506 SMART ring_2 134 175 IPR001841 -
Rops2g05355 506 MobiDBLite consensus disorder prediction 319 344 - -
Rops2g05355 506 FunFam RING-H2 finger protein ATL46 96 181 - -
Rops2g05355 506 SUPERFAMILY RING/U-box 113 186 - -
Rops2g05355 506 CDD RING-H2_EL5-like 133 176 - -
Rops2g05355 506 ProSiteProfiles Zinc finger RING-type profile. 134 176 IPR001841 -
Rops2g05355 506 Pfam Ring finger domain 133 176 IPR001841 -
Rops2g05355 506 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 108 181 IPR013083 -
Rops2g05355 506 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF13-LIKE 48 397 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g05355 Rops-Chr2 95444263 95446262 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g05355 68 499 C3H Transcription Factor Family AT2G18650 45.556 4.87e-104 316
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g05355 - - gmx:100797283 777.319
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g05355 2 95444263 95446262 Rops2g05355 2 95444263 95446262 ECH