Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Rops2g05354 | ATGCCTCCTCCTCCTCCTGATCAACGCCATGACCGTGCCCATGGTGATGGCCAATCCCAACCCCAACCCCAACCTAAACCAAACCCTAACCTCCTTTCCTTCTTCCTCAAACCCATAATCATGCTCCTTCTCACCTCCATCTTCTTCCTCTTCCTCGGCCTCGCCGCCTTCCTCCTCCTCAACCTCTTCCTCCTTGGTGGCGCCCTCCACCGCCTTCGCTTTCGCCCCACCGCCACGCGCCCCGTTACTCCCTCCAACGGCTTCCGCCCTCGTGACGTCAACAAGCTCCCCCACTTTCGGGTCTCCAAGGGATCCGCACCCGGACCCGACTCCCAGTGCGTCGTTTGTTTGGACGGTTTCCGTAATGGCCAGTGGTGTAGAAAGCTCGCCGCCTGCGGTCACGTCTTTCACCGTAGATGTATTGACACGTGGCTCGTTAAGGCGGCTGCTTGCCCTACTTGTCGGACACCTGTTCGATTGAATGCTGGGGCATCGGATTCTGTTGTAGATGTCCCAACTCAATTTTGGACCTGCCCAACTAACTCCAATGCTTTCCCTATTTTATAG | 567 | 0.5679 | MPPPPPDQRHDRAHGDGQSQPQPQPKPNPNLLSFFLKPIIMLLLTSIFFLFLGLAAFLLLNLFLLGGALHRLRFRPTATRPVTPSNGFRPRDVNKLPHFRVSKGSAPGPDSQCVVCLDGFRNGQWCRKLAACGHVFHRRCIDTWLVKAAACPTCRTPVRLNAGASDSVVDVPTQFWTCPTNSNAFPIL* | 189 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Rops2g05354 | 188 | SMART | ring_2 | 113 | 154 | IPR001841 | - | |
Rops2g05354 | 188 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 89 | 162 | IPR013083 | - | |
Rops2g05354 | 188 | PANTHER | E3 UBIQUITIN-PROTEIN LIGASE ATL42 | 16 | 165 | - | - | |
Rops2g05354 | 188 | Pfam | Ring finger domain | 112 | 155 | IPR001841 | - | |
Rops2g05354 | 188 | ProSiteProfiles | Zinc finger RING-type profile. | 113 | 155 | IPR001841 | - | |
Rops2g05354 | 188 | MobiDBLite | consensus disorder prediction | 1 | 28 | - | - | |
Rops2g05354 | 188 | SUPERFAMILY | RING/U-box | 109 | 161 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Rops2g05354 | Rops-Chr2 | 95422820 | 95423687 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Rops2g05354 | 26 | 160 | C3H Transcription Factor Family | AT2G18670 | 45.985 | 3.61e-31 | 110 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Rops2g05354 | - | - | gmx:102664895 | 215.698 |