Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g05342 ATGGGACTTCCTTCCCCTTCTAAAATACTAATTGGCCTTTCCTTAGACCCAGATGATAGCAAGGAGCTTCTCTCATGGGCAATAAGAGTTCTAGCCAAATCTAATGATACCATTGTGGCAGTGCATGTTCTTGTTGCTGAGGATAAGAAGAAGCGTGTCTCAGTCAGAAGAAGGCAATCACAACTTAGGAAGGCCAAAGCATATGTTATATCTGTGCTTGGAGAATTTGCACAGACTTGTTGGTCTAAGCAGGTTAATTTGGAGGCCAAAGTGGCACTCAGTTCGACAATTGGTGGAGGTTTATGCGAGGAAGCCAAGTCCATTTCTGCTGATTTTCTTCTTCTTCGTGGCTCAAGAAACCAATCAAATAAATTTGGAACCTCTAAAGGAATCACCAAGTATTGCTTTGAGCATGCACATGATGGCTGTACCATGGTCTCAGTTGGGAGACACACAAAGGCAGAGCCAAGTGCCAATTCAAATTCAACACATTTTCAAGATAATCATCGACAACCAAGTTCAAGAAGGTTTAAGAAGGATAACCAAGGTGACAAAGCTACTTCCCCTGTTCTTAAGGATTTTATCTCAGAAACAAATACACAGAACAGTTCACCAAGAACGGTGCTAGATGCACTTGAGGGACAATCAAATAGCACTGAAGATGACACCTTTAGCACTAGGGTCTCAAGCATCACAAATACCCCTTCATTGGGTTCTAAGATTAAGAGTCCATCCAAGTTAAGAAAAGCACAGTTCTCATTCAGGCTCATAGTTTCATTCCTTGGTTCACCATTCAGAAGAAAAAACTTCAACATATCCAAAAATGATAAGCGTCAGCCCCTGTTGCAGTGCTTCAGCTATGAAAAGATATCCAATGCTACCAACGAATTCCACCAAGATAATTTGGTTGGACGAGGAGGGTACTCTGAAGTATATAAAGGTGATCTTTCTGATGGAAGAACCATTGCTGTGAAGAGGTTAGCTAAGGACAACAAGAATCCTAACAAGGAAAAAGAGTTCCTTATGGAGTTGGGTGTTATTGGACATGTCTGTCATCCTAATGCTGCAACTTTATTGGGCTATTGCATTGAAAATGGGCTCTATCTGATCTTCAATTACTCTCAAAATGGAAACTTGGCAACTGCATTGCATGGTAAAGCAGGAAATTCCCTTGACTGGCCAATCAGATACAAAATTGCTATTGGAGTTGCAAGGGGTCTTCATTATCTTCATAAATGTTGCAAACACCGAATAATTCACCGTGACATTAAAGCCTCCAATGTTCTTCTGGGTCCTGATTACGAACCACAGATTACCGATTTTGGGCTTGCAAAGTGGCTTCCTAACAAGTGGACTCACCATGCTGTAATCCCCGTGGAGGGCACATTTGGATACTTAGCACCAGAGTACTTTATGCATGGAATTGTGGATGAGAAAACAGATGTTTTTGCATTTGGAATTCTTCTTTTGGAGATTGTAACTGGAAGGAGACCTGTTGATTCATCAAAACAAAACCTTCTCTTATGGGCAAAGCCTCTCATGGAATCAGGGAATATTACTGAGCTAGCTGATCCAAGATTGGAAGGTAAATATGATGAAGAGCAACTTTATAGGGTAGTGCTAACAGCTTCATACTGTGTGAGACAAACTGCCATGTGGCGTCCCCCAATGAGTGAGGTGTTAGAGTTGCTAACCAGTGGCCAAGACTGTGAGGTTGGAAAGAGCTGGAGGATCCCAAAGTTCACTTCTGATGAATTGGATGATTACTCTATGGTTTTTGGATATGATGTCCCCTCAGACATATCTCTGGAGGATTTTTTGTGA 1824 0.4161 MGLPSPSKILIGLSLDPDDSKELLSWAIRVLAKSNDTIVAVHVLVAEDKKKRVSVRRRQSQLRKAKAYVISVLGEFAQTCWSKQVNLEAKVALSSTIGGGLCEEAKSISADFLLLRGSRNQSNKFGTSKGITKYCFEHAHDGCTMVSVGRHTKAEPSANSNSTHFQDNHRQPSSRRFKKDNQGDKATSPVLKDFISETNTQNSSPRTVLDALEGQSNSTEDDTFSTRVSSITNTPSLGSKIKSPSKLRKAQFSFRLIVSFLGSPFRRKNFNISKNDKRQPLLQCFSYEKISNATNEFHQDNLVGRGGYSEVYKGDLSDGRTIAVKRLAKDNKNPNKEKEFLMELGVIGHVCHPNAATLLGYCIENGLYLIFNYSQNGNLATALHGKAGNSLDWPIRYKIAIGVARGLHYLHKCCKHRIIHRDIKASNVLLGPDYEPQITDFGLAKWLPNKWTHHAVIPVEGTFGYLAPEYFMHGIVDEKTDVFAFGILLLEIVTGRRPVDSSKQNLLLWAKPLMESGNITELADPRLEGKYDEEQLYRVVLTASYCVRQTAMWRPPMSEVLELLTSGQDCEVGKSWRIPKFTSDELDDYSMVFGYDVPSDISLEDFL* 608
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g05342 607 FunFam Putative receptor-like serine/threonine-protein kinase 264 373 - -
Rops2g05342 607 Gene3D HUPs 4 148 IPR014729 -
Rops2g05342 607 CDD USP_Like 8 140 - -
Rops2g05342 607 SMART serkin_6 297 564 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops2g05342 607 PANTHER OS08G0249100 PROTEIN 71 577 IPR046958 -
Rops2g05342 607 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 6 116 - -
Rops2g05342 607 Pfam Universal stress protein family 8 140 IPR006016 -
Rops2g05342 607 ProSiteProfiles Protein kinase domain profile. 297 607 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops2g05342 607 MobiDBLite consensus disorder prediction 192 208 - -
Rops2g05342 607 Gene3D Transferase(Phosphotransferase) domain 1 375 575 - -
Rops2g05342 607 Gene3D Phosphorylase Kinase; domain 1 263 373 - -
Rops2g05342 607 ProSitePatterns Protein kinases ATP-binding region signature. 303 325 IPR017441 GO:0005524
Rops2g05342 607 Pfam Protein kinase domain 297 507 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops2g05342 607 MobiDBLite consensus disorder prediction 169 186 - -
Rops2g05342 607 FunFam Probable receptor-like serine/threonine-protein kinase At5g57670 374 578 - -
Rops2g05342 607 ProSitePatterns Serine/Threonine protein kinases active-site signature. 418 430 IPR008271 GO:0004672|GO:0006468
Rops2g05342 607 SUPERFAMILY Protein kinase-like (PK-like) 273 564 IPR011009 -
Rops2g05342 607 MobiDBLite consensus disorder prediction 153 208 - -
Rops2g05342 607 MobiDBLite consensus disorder prediction 153 168 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g05342 Rops-Chr2 95153817 95157813 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g05342 285 603 Trihelix Transcription Factor Family AT1G70460 40.950 2.04e-76 255
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Rops2g05342 Pkinase 1.2e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g05342 - - gmx:100782832 1057.74