Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g05337 ATGGGGTCTGAAAAAAATATTGGCAAGTATAGGCTTTGCAGGACAATAGGAGAAGGTACATTCTCTAAGGTTAAGCTGGCTGTGAATGGCAACAATGGTGAGAAGGTTGCAATCAAAGTCATTGATAAGCATATGGTCATGGAAAGCAATCTTAAGTATCAGGTCAAAAGAGAGATTAGCACAATGAAACTTCTGCATCATCCCAACATTGTCAGAATTCATGAGGTTATTGGCACTAAAACGAAGATATACATTGTAATGGAATATGTAACAGGAGGCCAACTATTGGACAAGATGTCCTATGCCAAGCAGTTGAATGAGAATGAGGCAAGAAAACTATTCCAGCAACTTATTGATGCCTTGGATTACTGCCATAACAAAGGAGTTTATCATCGAGATCTAAAGCCAGAAAACTTGCTCCTTGACAGCAAGGGAAATCTTAAAGTGTCTGATTTTGGATTAAGTGCACTGAAAAAGCCTAATGATGTCTTAAACACGCGGTGTGGATCCCCCTGCTATGTGGCTCCTGAGGTTCTAATGAGCAAAGGGTATGATGGAGCAGTTGCTGATGTTTGGTCATGTGGGGTGATCCTTTTTGAATTAATTGCAGGTCATCTACCATTTGATGACCAGAACTTGATGAGCTTGTATCGTAAGATATGCAGAGCAGAATATGTATGTCCACCCTGGTTTACTCAAAATCAAAAGAAACTAATTGCCAAAATACTTGAACCACGTCCTGGAAAGCGGATAACTATACCAGATATTGTTGAAGATGAGTGGTTTCAGATAGACTATAAGCCTGCTTGTGCATATGAATTTGATCAGATCATTAACTTGGATGATGACAGTGCTGCTTTCGATTCAATTGAGGAGAAAACCAAAGAGTCAACGATACCCAAGTCCTCGAGTTTCATTAATGCGTTTCAACTAATAGCCATGTCTCAGGACCTTGATCTATCTGGCCTTTTCGAAGAACAGGATCACAAAAAGCAGACAACAAGGCTTGGATCCAAACACGCAATCATTGAAACGATAGAAAAAATAGAAGCTGCTGCAACAGATGTGAGACTGTCAATAGAGAAAATGAACAACCGTAAGATAAAAATGCACCCGAAACAGATAATGACCAGGTGTTCTAGATCATACTTTGACCTATCAGCCCAGGTGATAGAAGTTGCTCCAACCCATTGTGTTGTAGAAATATCAAAATCTGCAGGAGATCTAGGAATGTACAACGAATTTTGCGAAAGTTTATCAAATCTGCTCAAACAAAAATCTGGTGTGCCATCACAAAGCCAAGATTCTGAGGATAAATGCAACGCTGGCATAAAAAAGCAAGATGCTGAATGCAATGAAGAGCCAAATAGTGAAGATAGTGATTCATGGTTATAA 1395 0.395 MGSEKNIGKYRLCRTIGEGTFSKVKLAVNGNNGEKVAIKVIDKHMVMESNLKYQVKREISTMKLLHHPNIVRIHEVIGTKTKIYIVMEYVTGGQLLDKMSYAKQLNENEARKLFQQLIDALDYCHNKGVYHRDLKPENLLLDSKGNLKVSDFGLSALKKPNDVLNTRCGSPCYVAPEVLMSKGYDGAVADVWSCGVILFELIAGHLPFDDQNLMSLYRKICRAEYVCPPWFTQNQKKLIAKILEPRPGKRITIPDIVEDEWFQIDYKPACAYEFDQIINLDDDSAAFDSIEEKTKESTIPKSSSFINAFQLIAMSQDLDLSGLFEEQDHKKQTTRLGSKHAIIETIEKIEAAATDVRLSIEKMNNRKIKMHPKQIMTRCSRSYFDLSAQVIEVAPTHCVVEISKSAGDLGMYNEFCESLSNLLKQKSGVPSQSQDSEDKCNAGIKKQDAECNEEPNSEDSDSWL* 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g05337 464 Coils Coil 346 366 - -
Rops2g05337 464 FunFam Non-specific serine/threonine protein kinase 3 302 - -
Rops2g05337 464 Gene3D Transferase(Phosphotransferase) domain 1 90 284 - -
Rops2g05337 464 FunFam Non-specific serine/threonine protein kinase 1 89 - -
Rops2g05337 464 MobiDBLite consensus disorder prediction 426 464 - -
Rops2g05337 464 Pfam Protein kinase domain 10 262 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops2g05337 464 SMART serkin_6 10 262 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops2g05337 464 CDD CIPK_C 307 425 - -
Rops2g05337 464 Gene3D Phosphorylase Kinase; domain 1 1 89 - -
Rops2g05337 464 ProSitePatterns Protein kinases ATP-binding region signature. 16 39 IPR017441 GO:0005524
Rops2g05337 464 Gene3D Kinase associated domain 1, KA1 301 426 - -
Rops2g05337 464 SUPERFAMILY Protein kinase-like (PK-like) 7 263 IPR011009 -
Rops2g05337 464 FunFam Non-specific serine/threonine protein kinase 301 427 - -
Rops2g05337 464 ProSitePatterns Serine/Threonine protein kinases active-site signature. 129 141 IPR008271 GO:0004672|GO:0006468
Rops2g05337 464 ProSiteProfiles NAF domain profile. 301 325 IPR018451 GO:0007165
Rops2g05337 464 MobiDBLite consensus disorder prediction 439 453 - -
Rops2g05337 464 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 8 414 - -
Rops2g05337 464 ProSiteProfiles Protein kinase domain profile. 10 262 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops2g05337 464 Pfam NAF domain 304 362 IPR004041 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g05337 Rops-Chr2 95019417 95022279 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g05337 2 419 CBL-interacting serine-threonine protein kinases AT1G01140 49.292 9.34e-144 417
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Rops2g05337 Pkinase 5.5e-72 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g05337 - - gmx:100786097 758.059