Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g05326 ATGGATAGTCCCACAACGGTTCGATCACCGGCTACCGGTTCCGGTTCCGGTTCTGCACCTGGTTCAAACGATGATAGGCGTGTTAAGTTCTTGTGTAGCTTTCTAGGGAGCATAATGCCCCGTCCACAAGATGGGAAACTTCGTTATGTTGGTGGAGAGACACGTATTGTGAGTGTTCCTAGAGATATTAGTTATGAGGAGTTGATGGTGAAGATGAGAGAGTTGTATGAAGGGGTTGCTGTATTGAAGTACCAGCAACCTGATGAGGATCTTGATGCACTTGTTTCTGTTGTCAATGATGATGATGTGGTTAACATGATGGAAGAGTATGATAAGGTAGGTTCAGGGGATGGATTCACTAGGCTTAGGATTTTCTTGTTTTCGCAATCCGAACAGGATGGTTCCTCACATTTCATTGATGGGGATGACTCTGAGAGGAGGTATGTTGATGCATTGAATAGCTTGAATGATGCTTCTGACCTTAGGAAGTTTCAACAAACCGAGTTTCCTATGATTGGCACTGTTGAGGATATCCATGTGGCTGATCAGTTCTTTAATCCTATCAGTGTGGATAATGGGATTCATAGCCAGAGAAGTGGGGAACTACCTTTGTCACCTTACAATTCGCATCATCTCACGGTCCAGCACCAACAACCTATAGGCCATAGGTATAATGAAATGGATGCTCCGTGGAATCCTGCTTATTACTCTCCTAGGCATCATGGTCACCTTGACTCCAGATCATTGGTTGAATTTCCATCTTCTCCTTCTGGTACAAGGTACCGTATGCCATTTCCTGAGTTACCTGATAAGTGTATTGATAATAGAGTGTCAGATGAGTATGCTCGACATCACGTAAATCACCATCCTGTGTACGACAATCAACCACAGTATCCTGAAAATGTTGTGTGGATGACAACTGGAGCTGCACATGGTGAGAAGTCAGGTTTTTCTGGCAACATTCTTCATGGTCCCCATGTTCTTGATGGGAACAGTATATGTGAGCATTGTCGCATGAATTTTCAGAGAGGTCAACCGCATCTGGAGCATCCTAATATTAGTAATGGACTTCCGCCGGTTGCTAATAATTTATGCACTGAATGCCCCTCAAACAGGGATACTTTCACGGTGAATGCCGATGCAAAGTTACATCCTACAATCTATCCCAATGAGCCTAATAATGATCTTAGGTCTGTTTATAGTGATACTCAAAATCATGAGAGAGGATGGGGTTTGCAGCATCAGACAACTGCTCGGGTTGAGGAATCCAGAGGACATGTTTCTGGATCTGGAAGAGTGAGTGATCATTATGTTGGTGATGTTCCTGTTGTGAATTTCTCTCTTGGGCAAGGCAGTGTGACTGATGGACATACTTTGTCTTCCAATTATGTTCATCAACGGGCTGGACCTGAATTGGGGCCTGAACTGATCCCTGACCAAACTGTGGCTGCTGTACCGCATATACAAATTCCTCCTGTGGAAGAATGCAGTGTGCGGTATGGAAATACACCTTCCCCCTATGGAGTAGACAGTAATTACGCTGTGCCTCATGGACATGCTCCTGGTTATGCATTTTGGAGAAACACTCCAACTCCAGTTCATGTTGGACCACCTTCTCCACCTCAGCAGGTGGATGGCATGATAAATGCTGGATTAATCAGGAGAGAGGGCAGTCCTGGATGTTTCATTGGACCAGATAGTCAAAGTCCTTGGGTTGATTCCTCACAGAAATTGTCAGGACATGATGGGTCAGCTATCCCAGAATATCCTTATGCTAATGCTCTAAAGTTGAACCCCCTGGCACTTGGTCAGGAAACACAACACCCAATTACTGTTGATGCCATCCACCCCCTGCAGGACACAAATTCTGGTACCTGTTTGGAACCTGTGCAGCTGCCAAAATCATCTTTTAATATGGTTCCCAATAAAGAGGTTTTAAGAAATGATACTCATTTGACTGAAGCAATGAGCTTGCAATCTAAAAGTTTGCTTGGAGAAGGAAAAGAAGCAAAGAACAAGGACATGGTTGAGAACTCTAATGCGCAGAATATATCTTTTACTGAGCAAAATAAAATTGCTAAGAATGTATGTGAGGCTGCTGCTCCTGTTGGGCCTAATAATTCAAATTTAAAATTGGCAGCTGAGTGTGGACATGTTGAAAAACTGGTTGAGAAGGACCGTTCTACTCCAGAAGATTCTAAGCATTTAGTTGATCAATTCAACTTCTTGCCTGAGTTGATTGCTTCTGTAAATAGGGCTGCATTAGAAGGCAATGAGGAGGTGAAAGCTACAGCTGATGAGCATGCCAATTCTCAGATGCACAATTCAAATACCAAAGAAGTAACAGCAAATGAAGTAGAACCAGTGAATGCTCATGGTGATTTAGAACCGGACTCTGAAAATGACCATGTGGATACTTCTAAAATTGAGCCTACAAAGGCCGAGGCAGAAGCAATTGCTAGGGGATTGCAGACTATTAAAAATGATGATTTGGAGGAGATCCGTGAGCTAGGTTCTGGAACTTACGGGTCTGTTTATCATGGGAAATGGAAAGGTTCAGATGTTGCCATTAAGAGAATAAAAGCCAGTTGTTTTGCTGGAAGACCATCTGAAAGAGCAAGATTGATTGCAGATTTCTGGAAGGAGGCATTGATGCTGAGTTCATTGCATCATCCAAATGTTGTTTCCTTCTATGGTATTGTTCGTGATGGCCCTGATGGTTCTTTAGCAACAGTGACAGAATTCATGGTTAATGGATCTTTGAAACAGTTCTTGCATAAGAAAGATAGAACAATAGATCGCCGTAAGAGGCTCATTATAGCCATGGATGCTGCATTTGGGATGGAGTATTTGCATGGAAAGAACATTGTGCATTTTGATTTGAAATGTGAGAATCTATTGGTCAATATGAGAGATCCACAACGGCCAGTCTGCAAGATTGGTGATTTGGGTTTATCAAAGGTTAAACAACACACTCTAGTGTCTGGAGGGGTACGGGGAACTTTGCCGTGGATGGCACCTGAACTTCTTAGTGGGAAAAGCAATATGGTGTCAGAGAAGATTGATGTTTACTCATTTGGGATAGTCATGTGGGAAGTACTCACAGGGGATGAACCCTATGCTGATATGCATTGTGCTTCAATAATAGGAGGAATTGTGAACAGCACTTTACGTCCTCAAATCCCAACTTGGTGTGATCCGGAGTGGAAGTCTCTAATGGAAAGTTGTTGGGCTTCTGATCCCGTAGAAAGGCCATCATTTTCAGAAATTTCCAAGAAGCTGAGGATTAACTGCACTGTAGCATGGATTTTCTCCCAGGATGCGGCATGGTGCTCAAGAAAGCTACATGTGGAATATCAGTATGTCACAGTGGTTTTTGCAGTTTTACACGTGATCAGGGTGATGGTAGCAATAATCGTGGTTTTACCATCAACTGAGGAGGAACTATGCCTTCTGGAGGGATGTGTACATAAATTAACCAACCTGTCTCTTTTTTGTGCTTCATATGGAGGATAA 3516 0.4303 MDSPTTVRSPATGSGSGSAPGSNDDRRVKFLCSFLGSIMPRPQDGKLRYVGGETRIVSVPRDISYEELMVKMRELYEGVAVLKYQQPDEDLDALVSVVNDDDVVNMMEEYDKVGSGDGFTRLRIFLFSQSEQDGSSHFIDGDDSERRYVDALNSLNDASDLRKFQQTEFPMIGTVEDIHVADQFFNPISVDNGIHSQRSGELPLSPYNSHHLTVQHQQPIGHRYNEMDAPWNPAYYSPRHHGHLDSRSLVEFPSSPSGTRYRMPFPELPDKCIDNRVSDEYARHHVNHHPVYDNQPQYPENVVWMTTGAAHGEKSGFSGNILHGPHVLDGNSICEHCRMNFQRGQPHLEHPNISNGLPPVANNLCTECPSNRDTFTVNADAKLHPTIYPNEPNNDLRSVYSDTQNHERGWGLQHQTTARVEESRGHVSGSGRVSDHYVGDVPVVNFSLGQGSVTDGHTLSSNYVHQRAGPELGPELIPDQTVAAVPHIQIPPVEECSVRYGNTPSPYGVDSNYAVPHGHAPGYAFWRNTPTPVHVGPPSPPQQVDGMINAGLIRREGSPGCFIGPDSQSPWVDSSQKLSGHDGSAIPEYPYANALKLNPLALGQETQHPITVDAIHPLQDTNSGTCLEPVQLPKSSFNMVPNKEVLRNDTHLTEAMSLQSKSLLGEGKEAKNKDMVENSNAQNISFTEQNKIAKNVCEAAAPVGPNNSNLKLAAECGHVEKLVEKDRSTPEDSKHLVDQFNFLPELIASVNRAALEGNEEVKATADEHANSQMHNSNTKEVTANEVEPVNAHGDLEPDSENDHVDTSKIEPTKAEAEAIARGLQTIKNDDLEEIRELGSGTYGSVYHGKWKGSDVAIKRIKASCFAGRPSERARLIADFWKEALMLSSLHHPNVVSFYGIVRDGPDGSLATVTEFMVNGSLKQFLHKKDRTIDRRKRLIIAMDAAFGMEYLHGKNIVHFDLKCENLLVNMRDPQRPVCKIGDLGLSKVKQHTLVSGGVRGTLPWMAPELLSGKSNMVSEKIDVYSFGIVMWEVLTGDEPYADMHCASIIGGIVNSTLRPQIPTWCDPEWKSLMESCWASDPVERPSFSEISKKLRINCTVAWIFSQDAAWCSRKLHVEYQYVTVVFAVLHVIRVMVAIIVVLPSTEEELCLLEGCVHKLTNLSLFCASYGG* 1172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g05326 1171 ProSitePatterns Serine/Threonine protein kinases active-site signature. 956 968 IPR008271 GO:0004672|GO:0006468
Rops2g05326 1171 Gene3D Transferase(Phosphotransferase) domain 1 918 1111 - -
Rops2g05326 1171 Pfam Protein tyrosine and serine/threonine kinase 832 1094 IPR001245 GO:0004672|GO:0006468
Rops2g05326 1171 PRINTS Tyrosine kinase catalytic domain signature 913 926 IPR001245 GO:0004672|GO:0006468
Rops2g05326 1171 PRINTS Tyrosine kinase catalytic domain signature 950 968 IPR001245 GO:0004672|GO:0006468
Rops2g05326 1171 PRINTS Tyrosine kinase catalytic domain signature 1021 1043 IPR001245 GO:0004672|GO:0006468
Rops2g05326 1171 PRINTS Tyrosine kinase catalytic domain signature 1065 1087 IPR001245 GO:0004672|GO:0006468
Rops2g05326 1171 CDD STKc_MAP3K-like 837 1094 - -
Rops2g05326 1171 SUPERFAMILY Protein kinase-like (PK-like) 823 1093 IPR011009 -
Rops2g05326 1171 Pfam PB1 domain 43 128 IPR000270 GO:0005515
Rops2g05326 1171 SMART PB1_new 42 127 IPR000270 GO:0005515
Rops2g05326 1171 CDD PB1_UP2 31 127 - -
Rops2g05326 1171 MobiDBLite consensus disorder prediction 1 21 - -
Rops2g05326 1171 SUPERFAMILY CAD & PB1 domains 44 134 - -
Rops2g05326 1171 ProSitePatterns Protein kinases ATP-binding region signature. 837 858 IPR017441 GO:0005524
Rops2g05326 1171 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 824 918 - -
Rops2g05326 1171 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 919 1108 - -
Rops2g05326 1171 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 47 129 - -
Rops2g05326 1171 PANTHER SERINE-THREONINE PROTEIN KINASE 94 1094 - -
Rops2g05326 1171 MobiDBLite consensus disorder prediction 1 24 - -
Rops2g05326 1171 Gene3D Phosphorylase Kinase; domain 1 816 917 - -
Rops2g05326 1171 ProSiteProfiles Protein kinase domain profile. 831 1103 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops2g05326 1171 Gene3D - 46 130 - -
Rops2g05326 1171 SMART serkin_6 831 1096 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g05326 Rops-Chr2 94941063 94951745 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g05326 22 1095 MAP Kinase Kinase Kinase AT5G57610 54.842 0.0 1068
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-6 Rops2g05326 PK_Tyr_Ser-Thr 1.5e-61 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g05326 - - gmx:100779077 1799.64