Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g05303 ATGGAACCTACACACCTTCACGATGATTTCATTTTCCGTTCCAAACTCCCCGACATTTACATCCCAACACACCTTCCCCTCCACAGTTACTGCTTCGAAAACCTCTCTCAGTTCAAAGACCGTCCCTGCCTCATCAACGGTACCACCGGCGAGACCTTCAACTACGCCGACGTCGAACTCACCACCAGAAAAGTCGCCGCCGGACTCAACAAACTCGGCATCGAACAAGGCGACGTCATCCTCCTCCTCCTCCAAAACTGTCCCCAATTCGTCTTCGCATTTCTCGGTGCCTCTTACCGTGGCGCCACCGTCACCACCGCCAACCCGTTCTACACTCCGTCGGAGCTGGCCAAACAAGCAACAGCGTCAAACTCCAAACTCATCATAACACAAGCATCCTACATCGACAAAGTTAAGGATTTCGCAAGAGACAATAATGACATCAAAGTGATGTGCATTGATTCACCACCGGAAGGTTACTTGCATTTCTCGGAGTTAACTAACGCCGACGAGGCCAACATTCCCGCCGTGAAAATCTCCCCAGACGACGTCGTTGCGCTGCCGTATTCATCTGGCACGACGGGGCTTCCCAAAGGGGTGATGTTAACCCACAAAGGGTTAGTTACAAGCGTGGCGCAACAGGTTGATGGGGAGAACCCTAATTTGTATTTTCACAGCAATGATGTGGTGCTGTGTGTGCTTCCACTTTTTCACATTTATTCACTTAACTCTGTTTTGTTATGTGGACTTCGAGTTGGTGCTGCCGTTTTGATCATGCAGAAATTTGAGATCATTACGTTGTTGGAGTTGGTGCAAAAACACAAGGTGAGCATTGCGCCGTTCGTTCCACCCATCGTTTTGGCTATTGCGAAGAGCCAGGACGTGGAACGATACGACTTGTCGTCTATTCGAATGGTTATGTCTGGTGCGGCACCCATGGGAAAGGGACTTGAGGAAGCTGTTAGGGCCAAGCTTCCCAACGCGACACTGGGACAGGGTTACGGAATGACAGAGGCAGGACCAGTGCTTTCGATGTGCTTAGCGTTTGCGAAAGAGCCAATGGAGGTGAAATCAGGTGCGTGCGGGACTGTCGTAAGAAATGCGGATATGAAGATCGTTGACCCTGAGACACGCACTTCGCTTCCAAGGAATCAAGCTGGTGAGATTTGCATCAGAGGCAACCAGATCATGAAAGGTTACCTAAACGACAGAGAGGCCACAGAAAGAACCATAGACAAAAAGGGATGGTTACATACAGGTGATATTGGTTATATCGACGATAATGATGAGCTTTTCATAGTTGATCGGTTAAAGGAATTAATCAAATACAAAGGGTTTCAAGTGGCTCCAGCTGAACTTGAAACCATGTTGATTGCACACCCAAACATTTCTGATGCTGCTGTTGTACCCATGAAAGATGAAGCTGCAGGAGAGGTTCCGATTGCATTTGTTGTACGATCAAACGGTTCTAAGATCTCAGAGGATGAAATCAAGCAATACATCTCAAAACAGGTTGTGTTTTACAAGAGAATCAATAGGGTTTTCTTCGTGGGATCAATTCCAAAGGCACCCTCAGGTAAGATTTTGCGGAAAGACCTCAGAGCAAGGCTTGCAGCTGGTCTTGTTTGA 1629 0.4794 MEPTHLHDDFIFRSKLPDIYIPTHLPLHSYCFENLSQFKDRPCLINGTTGETFNYADVELTTRKVAAGLNKLGIEQGDVILLLLQNCPQFVFAFLGASYRGATVTTANPFYTPSELAKQATASNSKLIITQASYIDKVKDFARDNNDIKVMCIDSPPEGYLHFSELTNADEANIPAVKISPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYFHSNDVVLCVLPLFHIYSLNSVLLCGLRVGAAVLIMQKFEIITLLELVQKHKVSIAPFVPPIVLAIAKSQDVERYDLSSIRMVMSGAAPMGKGLEEAVRAKLPNATLGQGYGMTEAGPVLSMCLAFAKEPMEVKSGACGTVVRNADMKIVDPETRTSLPRNQAGEICIRGNQIMKGYLNDREATERTIDKKGWLHTGDIGYIDDNDELFIVDRLKELIKYKGFQVAPAELETMLIAHPNISDAAVVPMKDEAAGEVPIAFVVRSNGSKISEDEIKQYISKQVVFYKRINRVFFVGSIPKAPSGKILRKDLRARLAAGLV* 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g05303 542 Pfam AMP-binding enzyme 33 443 IPR000873 -
Rops2g05303 542 Pfam AMP-binding enzyme C-terminal domain 452 527 IPR025110 -
Rops2g05303 542 CDD 4CL 21 533 - -
Rops2g05303 542 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 8 535 - -
Rops2g05303 542 ProSitePatterns Putative AMP-binding domain signature. 187 198 IPR020845 -
Rops2g05303 542 Gene3D - 438 539 IPR045851 -
Rops2g05303 542 FunFam 4-coumarate--CoA ligase 2 439 540 - -
Rops2g05303 542 Gene3D - 4 437 IPR042099 -
Rops2g05303 542 FunFam Long-chain-fatty-acid--CoA ligase FadD 13 438 - -
Rops2g05303 542 SUPERFAMILY Acetyl-CoA synthetase-like 9 539 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g05303 Rops-Chr2 94599799 94615016 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g05303 7 505 Monolignol Biosynthesis Gene Families AT1G51680 71.006 0.0 730
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g05303 K01904 - gmx:100779668 937.947