Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g05287 ATGAGGACCACGGGCACCGGCAAGACCAAGTGGGCCATAGACGTGGCCAAACATTTCCAACCAGCAGAGATAGTGAACTCAGACAAAATGCAAGTTTACAAAGGTCTTGACGTCCCGCACCATCTTTTAGGAATGGTTGATCCTAACTCAAATTTCACTGCCAATGACTTTTGTCGTGAGGCTTGTTTGGCTATTGATTCCATCGTTGGAAGGGATGGGTTACCCATCATTGCTGGGGGCTCCAATTCTTACTTAGATGCTTTGGTGAACCATCACAGAGAGTTTAGGTTTAGGTACCAGTGTTGTTTCCTCTGGGTTGATGTGTCACTCCCTGTGTTCCATTCTTTTCTTCAAGCACGTGTGGATCGTATGATCAAAGTTGGTAAAGTTAATGAAGTTCATGAATTCTTCGACCTTTTTGCTGATTACACTAAAGGGATTAGAAGAGCTATTGGGGTGCCTGAATCTGATGATTTTCTAAGAGCAGAGGCAAATTCAGCTGATGAAAAAAATCAAAAAAAGGCTCCTTGA 531 0.4331 MRTTGTGKTKWAIDVAKHFQPAEIVNSDKMQVYKGLDVPHHLLGMVDPNSNFTANDFCREACLAIDSIVGRDGLPIIAGGSNSYLDALVNHHREFRFRYQCCFLWVDVSLPVFHSFLQARVDRMIKVGKVNEVHEFFDLFADYTKGIRRAIGVPESDDFLRAEANSADEKNQKKAP* 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g05287 176 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 1 170 IPR039657 -
Rops2g05287 176 Gene3D Crystal structure of tRNA isopentenylpyrophosphate transferase (bh2366) domain 110 172 - -
Rops2g05287 176 Gene3D - 1 109 IPR027417 -
Rops2g05287 176 Pfam IPP transferase 97 165 - -
Rops2g05287 176 Pfam IPP transferase 36 92 - -
Rops2g05287 176 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 4 145 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g05287 Rops-Chr2 94398493 94399202 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g05287 1 90 C2H2 Transcription Factor Family AT2G27760 43.689 3.60e-21 87.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g05287 K10760 - gmx:100812928 270.781