Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g05285 ATGTATGCGAGCCAATTCGACGGCAACGCAGCCTTCTCCGGCGGCGGTTTCATGCCTTCTCAGGCCACTCAGGGCCCTGATCCTTCCTTCTCTCCCTTTAAGAATCGTGATTCTCAGTCCTTGCTTCCTCTGACGGTCAAGCAGATAAACGATGCCGTTCAGTCAAGTGATGATAAAGCCAATTTGATTATTGACGGTGTGGACGTTAACAATGTTACTCTTGTTGGAAGGGTAGGCAACAAAGCTGGAAGGATTACTGATGTTACTTTTGTACTTGATGATGGTACTGGAAGGATTGACTGTAATAAATGGCTTCAGGAAGCTGTGGATGCAAATGAAGTTGAGGGTATCTTGGATGGAATGTATGTGCGGCTACATGGACACTTGAAAGGTTTTCAGGGTAAAAGGATCTTAAATGTTTTCTCTTTTAGGCCTGTGACTGACTTCAATGAGATTGCCAACCATTTCATTGATTGCATATATGTTCATCTCTATAATTCCAGGTTACGGGCCAGTGTCCCTAATCAGGCCAGTGTCCCTAATCAGCAGCATGTCACTAATCCCACACCAATTACTCCCACAAAAGGTTATCAAGCTCAAGCTGTCCCACCAAATCAATTCTCTGGTCAACATAACAATGGTCAGAAGAGTGTTGAACAGATGGTCTTAGATTTTTTACATCTACCCACAAACAGTGCAAGGGATGAGGGAGTCCCTCGTGATCTTATTGCACAGCATCTTGGAATTCCTTTGGATAAGCTCATGCTGGCTATTAAAAATCTTATCGAGGAAGGAGCCATTTATGAAGCTATAGCAGATCACTATAAGTCAATCGTCAATGGTTGA 846 0.435 MYASQFDGNAAFSGGGFMPSQATQGPDPSFSPFKNRDSQSLLPLTVKQINDAVQSSDDKANLIIDGVDVNNVTLVGRVGNKAGRITDVTFVLDDGTGRIDCNKWLQEAVDANEVEGILDGMYVRLHGHLKGFQGKRILNVFSFRPVTDFNEIANHFIDCIYVHLYNSRLRASVPNQASVPNQQHVTNPTPITPTKGYQAQAVPPNQFSGQHNNGQKSVEQMVLDFLHLPTNSARDEGVPRDLIAQHLGIPLDKLMLAIKNLIEEGAIYEAIADHYKSIVNG* 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g05285 281 PANTHER REPLICATION PROTEIN A-RELATED 5 278 IPR040260 -
Rops2g05285 281 MobiDBLite consensus disorder prediction 15 34 - -
Rops2g05285 281 Gene3D - 33 168 IPR012340 -
Rops2g05285 281 FunFam replication protein A 32 kDa subunit A-like 34 168 - -
Rops2g05285 281 MobiDBLite consensus disorder prediction 16 34 - -
Rops2g05285 281 Gene3D - 209 279 IPR036388 -
Rops2g05285 281 PIRSF RPA32 1 279 IPR014646 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Rops2g05285 281 SUPERFAMILY "Winged helix" DNA-binding domain 213 278 IPR036390 -
Rops2g05285 281 SUPERFAMILY Nucleic acid-binding proteins 41 167 IPR012340 -
Rops2g05285 281 CDD RPA2_DBD_D 71 164 - -
Rops2g05285 281 Pfam Replication protein A C terminal 163 273 IPR014892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g05285 Rops-Chr2 94369357 94374389 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g05285 1 229 Core DNA Replication Machinery Family AT3G02920 51.724 1.60e-79 238
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g05285 K10739 - gmx:100782819 434.876
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g05285 2 94369357 94374389 Rops2g05285 2 94369357 94374389 ECH