Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g05282 ATGGCTACGGAATCGTCTTTCGAAGGTGTTGCTCTTGATCCTTCTAAAAGCAGTAAATTGAGTATGGAGAAAAAAAGAGAGCTTGTATATGAAATATCTAGGTCTCATGGAGCATCCGAGATGCTGCAGTCATGGAGCCGTCAAGAGATTTTGCAAATCTTGTGTGTGGAGATGGGAAAAGAAAGGAAGTATACTGGGCTGACGAAGTTGAAAATCATAGAAAACCTTCTAAAAATTGTTTCTGAAAAGAAATCAGGGGGCCAGGAAATTGCCACCGACTCAGAACCACAATCTCTTCCTGCTCATGGTCAGAAACCTGCTAAAAGGCAGAGAAAAACTGAGAATCCATCTCGATTACCTGTTCCTGCAAATAATGTTTCAGTCAATAATGGTGGTGATGTGGGTAATGCCACATACTGCAAAAACTCAGCATGCAAGGCTACTCTAAATCAAGCAAATGCGTTCTGCAAAAGATGTTCATGCTGCATTTGTTATCAATATGATGACAACAAAGACCCTAGCCTGTGGTTAATATGTAGCTCTGAAAATCCATTTCCTGGTGTTTCTTGTGGCTTGTCATGCCACCTTGAGTGTGCTTTAAAACATGATGGTTCTGGAATTGGCAAAGATAGTGAGCGTCCCAAGCTTGATGGAGGCTTCTACTGTGTCTCTTGTGGGAAAGTAAATGATTTACTCGGATGCTGCAAAAAACAGCTGATGGTAGCAAAAGATACCAGACGTGTGGACATTCTCTGTTATCGTGTCTCCTTAAGCCAAAGACTTCTACAAGGGACTGAAATGTATCAAGAACTTTATAAAATTGTTGATGAAGCAGCAAAGAAACTTGAACCTGAAGTGGGTCCACTGACTGGATCACCAGTGAAGATTGGTAGGGGAATTGTGAACAGGCTTTCATCAGGACCTGAGGTTCAGAAACTCTGTGGTTTGGCACTGGAATCACTTGATTCACTGCTTTCGAAAAGGATCTCGCCTCTGTCATCCAATCTAACTATTCAAGATGCACATTCGCTGACTCCAACTATGGTGAGGTTTGAAGATGTCACTGCTACATCTCTCACGGTGGTTGTGGGTTCTGAAGATCCTTCTGGAGAAAATATTGTCAGTTACACCTTGTGGCATCGCAAAGCTGATGATGTGGACTATCCAGTTGACCCGACTTGCAAGTTGCTACCAAATAGAAGGTTCAGTATCAGGGATCTACTTCCAGCTACAGAATACAGTTTCAAAGTTGTTTCCAATGATTCGAGGGAGTTGGGTATCTGCGAAATTCAAGTCTCAACAGAGCATGGTGAGGATGAAGTCCCCAATTGCTCAGCAACCGAAAGAAGTCAGAGCCCAGTAACCAACTGTAGCAGCCTTTCCAATCCTTCATCAGTGGAAGATGAAACTAATAACAGTAACCCATATAGTGACCAGACTGATAATCGAGCAGATAATTATCATTCTTATCACAAGGATAGTGACCAGCTTGCTTCTGGAAATTTATCTAATGATGCCATTAACCGTTCCAATACGGGTGGCGTGGGACTTCCCACTGATGCAGATTCCTTGTCAGACAAGCAGCATGCTGTAGGAGTAACCAGCCCTGTAGTACCTAGTTCTGATGTACTAAAGCTTGAAAACAAGCATTCATCAGAGGAACAAGTCACTGAAGACATGAGCACTGATGATGGGTTGAATTCCCCAGTTCCAACAGGAAGAGAACGCGTGCCGTTAGTAGGTAGCTCAGAAGAAGGCTTGCCTAATACTCCCTGCAAGCTGGAAATACTTAAGGATGGGCCAGGAAGAAATGGGAGATCTAAATCCAGTGGCAAAGATCAAGAAAATGGATCTGGGAAAAGGGAGAAGCCACAAGATGGAAGCACATCCAAGAAGAGAAGTGGGGAAAGGCCAGATGAGGGCTGCGTGGCCAATGGTTTCTCAGATCGGGATTTTGAGTATTATGTGAAGGTGATTAGATGGTTAGAGTGTGAAGGACATATAGAAAAGAACTTCAGGCAGAAATTTCTGACATGGTACAGCTTAAGAGCAACCCCTCAAGAAGTAAAGATTGTGAAAATATACATTGATACATTTCTTGAAGATCCAGCATCTCTTGCAGAGCAACTTGTGGACACCTTCTCAGAATGCATATCAAGCAAGAGAACATCAGTGGTGCCGGCTGGGTTCTGCATGAAGCTTTGGCATTGA 2211 0.4319 MATESSFEGVALDPSKSSKLSMEKKRELVYEISRSHGASEMLQSWSRQEILQILCVEMGKERKYTGLTKLKIIENLLKIVSEKKSGGQEIATDSEPQSLPAHGQKPAKRQRKTENPSRLPVPANNVSVNNGGDVGNATYCKNSACKATLNQANAFCKRCSCCICYQYDDNKDPSLWLICSSENPFPGVSCGLSCHLECALKHDGSGIGKDSERPKLDGGFYCVSCGKVNDLLGCCKKQLMVAKDTRRVDILCYRVSLSQRLLQGTEMYQELYKIVDEAAKKLEPEVGPLTGSPVKIGRGIVNRLSSGPEVQKLCGLALESLDSLLSKRISPLSSNLTIQDAHSLTPTMVRFEDVTATSLTVVVGSEDPSGENIVSYTLWHRKADDVDYPVDPTCKLLPNRRFSIRDLLPATEYSFKVVSNDSRELGICEIQVSTEHGEDEVPNCSATERSQSPVTNCSSLSNPSSVEDETNNSNPYSDQTDNRADNYHSYHKDSDQLASGNLSNDAINRSNTGGVGLPTDADSLSDKQHAVGVTSPVVPSSDVLKLENKHSSEEQVTEDMSTDDGLNSPVPTGRERVPLVGSSEEGLPNTPCKLEILKDGPGRNGRSKSSGKDQENGSGKREKPQDGSTSKKRSGERPDEGCVANGFSDRDFEYYVKVIRWLECEGHIEKNFRQKFLTWYSLRATPQEVKIVKIYIDTFLEDPASLAEQLVDTFSECISSKRTSVVPAGFCMKLWH* 737
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g05282 736 MobiDBLite consensus disorder prediction 438 483 - -
Rops2g05282 736 CDD PHD_VIN3_plant 160 225 - -
Rops2g05282 736 SUPERFAMILY Fibronectin type III 346 441 IPR036116 GO:0005515
Rops2g05282 736 MobiDBLite consensus disorder prediction 599 642 - -
Rops2g05282 736 Gene3D Immunoglobulins 330 426 IPR013783 -
Rops2g05282 736 ProSiteProfiles Fibronectin type-III domain profile. 345 439 IPR003961 GO:0005515
Rops2g05282 736 MobiDBLite consensus disorder prediction 493 518 - -
Rops2g05282 736 MobiDBLite consensus disorder prediction 436 642 - -
Rops2g05282 736 CDD FN3 346 426 IPR003961 GO:0005515
Rops2g05282 736 PANTHER VIN3-LIKE PROTEIN 2-RELATED 10 736 IPR044514 GO:0010048|GO:0040029
Rops2g05282 736 SMART FN3_2 343 426 IPR003961 GO:0005515
Rops2g05282 736 MobiDBLite consensus disorder prediction 87 127 - -
Rops2g05282 736 Pfam PHD - plant homeodomain finger protein 140 259 IPR032881 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g05282 Rops-Chr2 94321318 94326420 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g05282 4 484 PHD Gene Family AT4G30200 54.143 8.93e-162 479
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g05282 - - gmx:100794721 1285.78
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g05282 2 94321318 94326420 Rops2g05282 2 94321318 94326420 ECH