Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g05276 ATGGTAGTTTCAAAAATTAGAAGATGCCTTGAAGAGGGTATTGAATTCCAAGGTGAGTTGCTAAACTTTAGGAAATATGGTTCTCCACTAATGAACAGATTGCGACTAACACCTATATATGGAGATGATGAGACGACAACACATGTCATTGGTATCCAGTTCTTCACAGAGACAAACATTATTCTTGGTCCTATTCTAGATTCTACAATTAAGGAATCTGCTAAGTCATCTTGTCAATTTCATTATGCGTTTTCCTCATTGCATCATCTTCCAGTGGAGGACCAAAATATATCTCACCAAGATTGTGGGATATTGTATTTGAGTGAAGAGGTTCTGTCTCTAAAGATATTTGCTCGATTAACTCCAAGAGATATTGCATCAGTTAACTCTATTTACTCTGAAGCACTCTTGAGTAACACTTTCCTCCTTGGTTTGTTAATAAAGAAGCCTGTTTGGAGAGAAATACATGTGGCAAGGACCCTACCTTCTTATTTGGGCCACACATTGCCTATTTATAGTGGTAGGAAAACTCTGATGTATTGGGGTCTGTTCAAGATTGAGACCTTGCATTTCTATTCCAGCGATGTGTTCACAATGGATTTAAGTGAGGAGCAACTTTATTGGATACGTGTGACAAGGAGTGGAATGCCAGGTGTTAGACGCCCTGGGGGCATAACTCACCCTCCCATACTTGATCATACAACTGTTAGTCTTCCAGGTGGGAGAATTCTAATATTTGGTGGGTCTGTTGCAAGTCTTCACTCTGCCTCTCAACTTTACATCCTTGATCCAACTAATGAGAAGCCTACATGGTGA 816 0.3983 MVVSKIRRCLEEGIEFQGELLNFRKYGSPLMNRLRLTPIYGDDETTTHVIGIQFFTETNIILGPILDSTIKESAKSSCQFHYAFSSLHHLPVEDQNISHQDCGILYLSEEVLSLKIFARLTPRDIASVNSIYSEALLSNTFLLGLLIKKPVWREIHVARTLPSYLGHTLPIYSGRKTLMYWGLFKIETLHFYSSDVFTMDLSEEQLYWIRVTRSGMPGVRRPGGITHPPILDHTTVSLPGGRILIFGGSVASLHSASQLYILDPTNEKPTW* 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g05276 271 SUPERFAMILY Galactose oxidase, central domain 196 268 IPR011043 -
Rops2g05276 271 PANTHER BACTERIOOPSIN TRANSCRIPTIONAL ACTIVATOR 133 271 - -
Rops2g05276 271 SUPERFAMILY PYP-like sensor domain (PAS domain) 3 53 IPR035965 -
Rops2g05276 271 Gene3D PAS domain 1 64 - -
Rops2g05276 271 Gene3D - 148 271 IPR015915 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g05276 Rops-Chr2 94254778 94256045 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g05276 3 53 AGC Kinase Gene Family AT5G58140 45.098 1.12e-07 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g05276 K12115 - gmx:100301887 205.297