Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g05273 ATGGCGAGCAACAAGGCAATTTCCCTTGAGGAAATCAAGAACGAGACTGTTGATCTGGAACGTATTCCAGTTGAGGAAGTGTTTGAGCAATTGAAATGTACCAGAGAAGGTTTGTCCTCAGAAGAAGGAGCCAATCGGCTTCAAATATTTGGGCCAAACAAGCTAGAGGAGAAAAAGGAAAGCAAACTGCTCAAGTTTCTCGGGTTCATGTGGAATCCTCTGTCATGGGTCATGGAAGCTGCGGCTATCATGGCAATTGCTCTTGCAAATGGTGATGGGAAGCCCCCGGATTGGCAAGATTTTGTGGGTATTGTTTGCTTGTTGGTGATCAACTCCACCATCAGTTTCATTGAAGAAAATAATGCTGGAAATGCAGCTGCTGCTCTTATGGCTGGTCTTGCTCCTAAGACAAAGGTAATCAATTGA 426 0.446 MASNKAISLEEIKNETVDLERIPVEEVFEQLKCTREGLSSEEGANRLQIFGPNKLEEKKESKLLKFLGFMWNPLSWVMEAAAIMAIALANGDGKPPDWQDFVGIVCLLVINSTISFIEENNAGNAAAALMAGLAPKTKVIN* 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g05273 141 Pfam Cation transporter/ATPase, N-terminus 22 84 IPR004014 -
Rops2g05273 141 SMART Cation_ATPase_N_a_2 18 90 IPR004014 -
Rops2g05273 141 Gene3D - 69 141 - -
Rops2g05273 141 PANTHER CALCIUM-TRANSPORTING ATPASE 20 140 - -
Rops2g05273 141 SUPERFAMILY Calcium ATPase, transmembrane domain M 18 135 IPR023298 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g05273 Rops-Chr2 94182721 94185434 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g05273 7 141 Primary Pumps ATPases AT2G07560 84.444 1.96e-64 209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g05273 K01535 - rvl:131333162 238.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g05273 2 94182721 94185434 Rops11g01701 11 26592936 26601721 PCT