LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Rops2g05269	ATGGAAACGCCTAGTTTTGTGGTCTTGTCATTGCTTCTTCTCTTGACTTCTACAACTACAAGCTCAGCTCAGCTCTCTGGTGGCTTCTATAACAAAGTATGCCCCGATGTGGAGCAGCTGGTTCGTTCTGCAGTGACACAGAAATTCCAACAGACCTTTGTGACTGCTCCTGCCACTCTTCGACTCTTCTTCCATGATTGCTTTGTGCGGGGTTGTGATGCTTCGGTTTTGCTTGCATCTCCGAATAATCAAGCAGAGAAGGATCATCCTGATGATGTGTCACTAGCTGGAGATGGCTTTGACACTGTGGTTAAGGCCAAGGCAGCTGTTGATAGGGATCCTAAGTGTCGAAATAAAGTCTCTTGTGCTGATATTCTAGCTCTGGCTACTAGGGATGTCGTCAATTTGGCAGGGGGGCCATTTTATAATGTTGAATTGGGAAGGCGTGATGGGAGAATATCTACTATTGCCAGTGTTCAACGCCGTCTTCCTAGCCCTGATTTCAATTTGGATCAGCTCAATTCCATGTTTAGCTTCAATGGCCTCTCCCAGACAGATATGATTGCATTATCAGGTGGACATACAATTGGGTTCTCTCACTGCAGCCGCTTCTCAAAAAGAATCTACAACTTCAGCCCCAGAAGCACAATTGACCCAACACTAAATTTACAATATGCTTTTCAGCTAAGGCAAATGTGCCCTTTAAAAGTTGATCCTAGAATTGCCATAAACATGGATCCTGTCACACCTCAAAAGTTTGACAACCAATACTTCAAGAATCTGCAACAGGGAAAAGGTCTATTCACTTCTGATCAGGTGCTGTTTACAGATGCAAGGTCAAAGGACACAGTCAACTTATTTGCATCAAATGAAAAAGCTTTTGAGAGTGCTTTTATCAATGCTATTACTAAGTTGGGAAGGGTTGGTGTCAAAACTGGAAATCAAGGTGAAATTAGGATTGATTGCACCAGGCCCAACTAG	981	0.4353	METPSFVVLSLLLLLTSTTTSSAQLSGGFYNKVCPDVEQLVRSAVTQKFQQTFVTAPATLRLFFHDCFVRGCDASVLLASPNNQAEKDHPDDVSLAGDGFDTVVKAKAAVDRDPKCRNKVSCADILALATRDVVNLAGGPFYNVELGRRDGRISTIASVQRRLPSPDFNLDQLNSMFSFNGLSQTDMIALSGGHTIGFSHCSRFSKRIYNFSPRSTIDPTLNLQYAFQLRQMCPLKVDPRIAINMDPVTPQKFDNQYFKNLQQGKGLFTSDQVLFTDARSKDTVNLFASNEKAFESAFINAITKLGRVGVKTGNQGEIRIDCTRPN*	327

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Rops2g05269	326	ProSitePatterns	Peroxidases active site signature.	56	67	IPR019794	GO:0004601
	Rops2g05269	326	ProSitePatterns	Peroxidases proximal heme-ligand signature.	186	196	IPR019793	-
	Rops2g05269	326	PRINTS	Plant peroxidase signature	98	111	IPR000823	GO:0004601\|GO:0006979\|GO:0020037
	Rops2g05269	326	PRINTS	Plant peroxidase signature	58	78	IPR000823	GO:0004601\|GO:0006979\|GO:0020037
	Rops2g05269	326	PRINTS	Plant peroxidase signature	34	53	IPR000823	GO:0004601\|GO:0006979\|GO:0020037
	Rops2g05269	326	PRINTS	Plant peroxidase signature	185	197	IPR000823	GO:0004601\|GO:0006979\|GO:0020037
	Rops2g05269	326	PRINTS	Plant peroxidase signature	260	277	IPR000823	GO:0004601\|GO:0006979\|GO:0020037
	Rops2g05269	326	PRINTS	Plant peroxidase signature	244	259	IPR000823	GO:0004601\|GO:0006979\|GO:0020037
	Rops2g05269	326	PRINTS	Plant peroxidase signature	119	129	IPR000823	GO:0004601\|GO:0006979\|GO:0020037
	Rops2g05269	326	PRINTS	Plant peroxidase signature	300	313	IPR000823	GO:0004601\|GO:0006979\|GO:0020037

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Rops2g05269	Rops-Chr2	94076813	94079160	Dispersed/Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Rops2g05269	5	326	Peroxidase	AT2G18980	74.534	1.91e-178	494

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Rops2g05269	K00430		-	gmx:100804620	569.311

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