Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g05267 ATGGAGCCAACATGGAACGGTCTCTTACCTTTATCTGAATGGGATCAGATAGGCTTCATAACTCACGTCCCCATAATCACCTTCTACCGTGCCTCACAAAACAAGAACTCCACCATTGTCAGCACCTTGAAAGAGTCCTTAAGCAGAGTCCTTGTACCGTTTTATCCACTCGCCGGTCGTTTACATTGGATAGGCAACGGTCGTTTTGAGCTGGACTGCAATGCCATGGGTGTTCGCTTCATTGAAGCTGAGTCCTCATTAACTATAGATGATTTCGGTGACTTTTCACCCTCTTCTGAGTTCCATTACCTTTTCCCAAGTGTAAACTATATCCTCCCACTTCATGAATTGCCTTTGCTTCTTGTTCAGCTCACGATCTTCAAGTGTGGCGGCTTCAGCGTCAGCCTCAAAGTCTCACACGCGGTTGTTGATGGAACAAGTATCTCACACTTCATTTCTGAGTGGGCAAGGCTTGCAAGAGGTGAGCCCTTGAAAACGATGCCGTTTCACGATCGAAAAGTGTTGCGTGCAGGAGAAGCTCCTCTGGTGGTGCCGTATCTACCGTGCCATGGTGGTCAGTGGGAGTTCAATCTCCCTCCTTTATTACCCGACCAATTGGAAGGGAAGAAGAAAACCACTATGGCAATCTTAAAACTGAGCAAAATCCAGATTGAGAAGTTGAGAAAGAGAGCAAACGAGAGTTTGAATAATGGGGGGCGTGGTTATTCACGGTATGAGACTGTAGCTGGACACATATGGAGAAGTGCATGCAAGGCAAGAGGGCACAAACAGGACCAACCAACAGCATTGGGTGTTTGTGTTGATTCAAGGTTTCGCATGCAACCTCCATTGCCAAAAGGGTATTTTGGGGATGCTACTTTGGAGGTGGTTACGACTAGTGTTGCGGGTGATTTGATGTCAAAGCCATTGGGGTATGCGTCAAGTAGGGTAAGGGACGCGATTGAGAAGGTGACTGATGAGTATGTGAGGTCAGGGATTGAGTTCTTTAAGAAGCAAGAGGATTTGACAAAGTTTCAAGATCTTCATGCAAAAGAGAATGGGCAGTGGCCTTTCTATGAGAACCCAAACATGGGGGTGGTTAGTTGGTTGAGTTTACCGATTGATGGGCTTGATTTTGGGTGGGGGAAGGAGGTTTACTTGGGTCCGGGGACATTGGACTTTGATGGAGATTCTTTGCTTCTTCCAGGTCTAGATCGGGATGGATCTTTGCTCCTTGCTATTTGTCTGCAAGAGGTTCATATGGATGCCTTTAAGAAACATTTTTATGAAGACATTATGTAA 1302 0.4608 MEPTWNGLLPLSEWDQIGFITHVPIITFYRASQNKNSTIVSTLKESLSRVLVPFYPLAGRLHWIGNGRFELDCNAMGVRFIEAESSLTIDDFGDFSPSSEFHYLFPSVNYILPLHELPLLLVQLTIFKCGGFSVSLKVSHAVVDGTSISHFISEWARLARGEPLKTMPFHDRKVLRAGEAPLVVPYLPCHGGQWEFNLPPLLPDQLEGKKKTTMAILKLSKIQIEKLRKRANESLNNGGRGYSRYETVAGHIWRSACKARGHKQDQPTALGVCVDSRFRMQPPLPKGYFGDATLEVVTTSVAGDLMSKPLGYASSRVRDAIEKVTDEYVRSGIEFFKKQEDLTKFQDLHAKENGQWPFYENPNMGVVSWLSLPIDGLDFGWGKEVYLGPGTLDFDGDSLLLPGLDRDGSLLLAICLQEVHMDAFKKHFYEDIM* 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g05267 433 Gene3D - 1 185 IPR023213 -
Rops2g05267 433 SUPERFAMILY CoA-dependent acyltransferases 6 163 - -
Rops2g05267 433 Pfam Transferase family 2 430 - -
Rops2g05267 433 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 9 429 - -
Rops2g05267 433 FunFam Tryptamine hydroxycinnamoyl transferase 203 429 - -
Rops2g05267 433 Coils Coil 217 237 - -
Rops2g05267 433 Gene3D - 203 431 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g05267 Rops-Chr2 94034542 94036120 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g05267 22 430 Monolignol Biosynthesis Gene Families AT5G48930 41.063 5.44e-108 324
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g05267 K13065 - gmx:100777007 599.742