Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g05266 ATGTCAGTAACCTCCAAAGGGTGTTACTCCGTGAGGCCCATGGAGCCAACATGGAGCGGTCGCTTACCTTTATCTGAATGGGATCAAACAGGCCCCATAACTCACGTGCCCACAATCTACTTCTACCGTCCCTCACAAAACTGGGACTACACCACCATTGCCAGCACCTTGAAAGAGTCCTTAAGCAGAGTTCTTGTGCCGTTTTATCCACTCGCCGGTCGTTTACATTGGATAGGCAACGGTCGTTTTGAGCTGGAGTGCAATGCCATGGGTGTTCACTTCATTGAAGCTGAGTCCTCATTAAATTTAGATGATCTCGGTGACTTTTCATCCTCTTCCCACTACCATTACCTTGTCCCAAGTGTAGACTATACCCTCCCACTTCATGAGTTGCCCTTGGTTCTGGTTCAGTTCACGATGTTCAGGTGTGGCGGCATCAGCATCTGTTTCAAAAAATCTCATGCGGTTGCAGATGGACCAAGTGCCTTACACTTCGTTTCTGAGTGGGCAAGGCTTGCACGGGGTGAGCCCTTGCAAACGATGCCGTTTCATGATCGGAAAGTGTTACGAGCAGGAGAAGCTCCTCTACCGTGTAACGGTGGTTCATGGGAGTTCCATCCCCTTCCATTGTTGCTTGGCCAAACAGATAATATGGAGGAAAGGAAGAAGAAAACCACTGTGGCTATCAAACTGAGCAAAACCCAAGTTGAGAAGTTGAGAAAAACGGCAAATGAACGTCACAATGGGCGTGGTTATACACGGTATGAGACTGTAACTGGGCACATATGGAGAAGTGCATGCAAGGCAAGAGGGCACAAACAGGAACAACCAACCGGTCTGGCTGTTTGTGTTGATTCGAGGGATCGCATGCAGCCTCCTTTGCCAAAAGGGTATTTTGGGAATGCCACTTTGGATGTGGTTGCTACTAGTCTTGCGGGTGATTTGATGTCAAAGCCATTGGGGTATGCATCGAGTAGAATAAGGGAGGCAATTGAGAAGGTGACTGATGAGTACGCGAGGTCAGGGATTGAGTTCTTTAAGAAGCAGGAGGATTTGACAAAGTTTCAAGATCTTCACGCAATAGGGAATGAAGACAAGTGGCTTTTCTGCTATGAGAACCCAAATCTGGGGGTGGTTAGTTGGTTGACGTTACCGGTCTATGGGCTTGATTTTGGGTGGGGAAAGGAGGTTTACATGGGTCCGGTAACACTGGACTTTGATGGAGATTCTGTTCTTCTTCCCTGTCCAGATGGGGATGGATCTCTGCTCGTTGCTATTTGTTTGGAAGAGGTTCATATGGATGCGTTTAAGAAGCATATTTATGAAGACATTATGTAA 1338 0.4738 MSVTSKGCYSVRPMEPTWSGRLPLSEWDQTGPITHVPTIYFYRPSQNWDYTTIASTLKESLSRVLVPFYPLAGRLHWIGNGRFELECNAMGVHFIEAESSLNLDDLGDFSSSSHYHYLVPSVDYTLPLHELPLVLVQFTMFRCGGISICFKKSHAVADGPSALHFVSEWARLARGEPLQTMPFHDRKVLRAGEAPLPCNGGSWEFHPLPLLLGQTDNMEERKKKTTVAIKLSKTQVEKLRKTANERHNGRGYTRYETVTGHIWRSACKARGHKQEQPTGLAVCVDSRDRMQPPLPKGYFGNATLDVVATSLAGDLMSKPLGYASSRIREAIEKVTDEYARSGIEFFKKQEDLTKFQDLHAIGNEDKWLFCYENPNLGVVSWLTLPVYGLDFGWGKEVYMGPVTLDFDGDSVLLPCPDGDGSLLVAICLEEVHMDAFKKHIYEDIM* 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g05266 445 Pfam Transferase family 1 442 - -
Rops2g05266 445 Gene3D - 1 205 IPR023213 -
Rops2g05266 445 FunFam Tryptamine hydroxycinnamoyl transferase 213 441 - -
Rops2g05266 445 Gene3D - 213 443 IPR023213 -
Rops2g05266 445 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 11 441 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g05266 Rops-Chr2 93957686 93959023 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g05266 1 442 Monolignol Biosynthesis Gene Families AT5G48930 39.052 6.87e-113 337
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g05266 K13065 - gmx:100777007 659.448