Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g05264 ATGGCAGTAACCTTCAAAGGGTGTTACTCCGTGAGGCCCATGGAGCAAACATGGAGCGGTCGCTTGCCTTTATCTGAATGGGATCAAACAGGCCCCATAACTCACGTGCCCACAATCTACTTCTACCGTCCCTCACAAAACTGGGACTACACCACCATTGCCAGCACCTTGAAAGAGTCCTTAAGCAGAGTTCTTGTGCCGTTTTATCCACTCGCCGGTCGTTTACATTGGATAGGCAACGGTCGTTTTGAGCTGGAGTGCAATGCCATGGGTGTTCACTTCATTGAAGCTGAGTCCTCATTAACTTTAGATGATCTCGGTGACTTTTCACCCTCTTCCCACTACCATTACCTTGTCCCAAGTGTAGACTATACCCTCCCACTTCATGAGTTGCCCTTGGTTCTGGTTCAGTTCACGATGTTCAGGTGTGGCGGCATCAGCATCTGCTTCAAAAACTCTCATGCGATTGCAGATGGACCAAGTGCCTTACACTTCATTTCTGAGTGGGCAAGGCTCGCAAGAGGTGAGCCCTTGCAAACGACGCCGTTTCTTGATCCAAAAGTGTTGCGTGCTGGAGAAGCTCCTCTACCGTGTAACGGTGGTTCATGGGAGTTCCATCCCCCTCCACTGTTGCTTGGCCAAACAGATAATATGGAGGAAAGGAAGAAGAAAACCACTGTGGCTATCATCAAACTGAGCAAAACCCAAGTTGAGTTGTTGAGAAAAACGGCAAATGAAAGTTGGCATAGGCCTCACAATGGGCGTGGTTATTCACGGTATGAGACTGTAGCTGGACACATATGGAGAAGTGCATGCAAGGCAAGAGGGCACAAACAGGAACAACCAACCGGTCTGGCTGTTTGTGTTGACTCGAGGGATCGCATGCAGCCTCCGTTACCTAAAGGGTATTTTTGGAATGCCACATTGGATGTGGTTGCTACTAGTCTTGCGGGTGATTTGATGTCAAAGCCATTAGGGTATGCATCGAGTAGAATAAGGGAGGCAATTGAGAAGGTGACAGATGAGTACGTGAGGTCAGGGATTGAGTTCTTTAAAAAGCAGGAGGATTTGACAAAGTTTCAAGATCTTCACGCAACAGGGAATGAAGACAAGTGGCTTTTCTGCTATGAGAACCCAAATCTGGGGGTGGTTAGTTGGTTGACGTTACCGGTCTATGGGCTTGATTTTGGGTGGGGAAAGGAGGTTTACATGGGTCCGGTAACACTGGACTTTGATGGAGATTCTGTTCTTCTTCCCTGTCCAAATGGGGATGGATCTCTGCTAGTTGCTATTTGTTTGGAAGAGGTTCATATGGATGCGTTTAAGAAGCATATTTATGAAGACATTATGTAA 1353 0.4738 MAVTFKGCYSVRPMEQTWSGRLPLSEWDQTGPITHVPTIYFYRPSQNWDYTTIASTLKESLSRVLVPFYPLAGRLHWIGNGRFELECNAMGVHFIEAESSLTLDDLGDFSPSSHYHYLVPSVDYTLPLHELPLVLVQFTMFRCGGISICFKNSHAIADGPSALHFISEWARLARGEPLQTTPFLDPKVLRAGEAPLPCNGGSWEFHPPPLLLGQTDNMEERKKKTTVAIIKLSKTQVELLRKTANESWHRPHNGRGYSRYETVAGHIWRSACKARGHKQEQPTGLAVCVDSRDRMQPPLPKGYFWNATLDVVATSLAGDLMSKPLGYASSRIREAIEKVTDEYVRSGIEFFKKQEDLTKFQDLHATGNEDKWLFCYENPNLGVVSWLTLPVYGLDFGWGKEVYMGPVTLDFDGDSVLLPCPNGDGSLLVAICLEEVHMDAFKKHIYEDIM* 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g05264 450 Gene3D - 1 204 IPR023213 -
Rops2g05264 450 FunFam Tryptamine hydroxycinnamoyl transferase 213 446 - -
Rops2g05264 450 Pfam Transferase family 1 447 - -
Rops2g05264 450 Gene3D - 214 448 IPR023213 -
Rops2g05264 450 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 11 446 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g05264 Rops-Chr2 93925487 93927383 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g05264 1 447 Monolignol Biosynthesis Gene Families AT5G48930 39.150 1.51e-114 341
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g05264 K13065 - gmx:100777007 659.062