Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g05263 ATGAGCTCTATTCGTCTTACAGTGACAGCACTGTGTTGTGTAGCGGTTGTGCTTGGAGGTTTACTCTTCTCCTCCAATGCACAACTTGATGCCTCTTTTTACAGGGATACCTGTCCTAAAGTTCAGTCTATTATCAAGACAGCGGTGGAAAATGCTTGCCCTGGCATAGTTTCTTGTGCTGATATTCTTGCCCTTGCTGCTGAAAAATCTTCTGTTCTGGCTGGTGGTCCTGATTGGAAAGTTCCTTTGGGAAGAAGGGATAGTTTAACAGCCAACAAAACTCTTGCTAATCAAAAGCTTCCAGGTCCCTCTTCCAGCCTAGATGGACTTAAATCCGCCGCCTTTGCTGCTCAAGGCCTCAGCACTACTGATCTAGTTGCACTCTCAGATACCATTAGCATTGTCAACAAGTTCAGTGGTAACCAAAATGCTTTCTTTGACAGCTTTGGAGCTGCAATGATTAAAATGGGTAATATTGATGTGCTAACCGGGAAGAATGGAGAAATCCGAAAACATTGCAACTTTGTTAACCAAAATTCTGCTCAACTAGGTATAACCAGAGAATCATCAGAGGAGGGTATAGTTAGCTCGATCTAA 597 0.4322 MSSIRLTVTALCCVAVVLGGLLFSSNAQLDASFYRDTCPKVQSIIKTAVENACPGIVSCADILALAAEKSSVLAGGPDWKVPLGRRDSLTANKTLANQKLPGPSSSLDGLKSAAFAAQGLSTTDLVALSDTISIVNKFSGNQNAFFDSFGAAMIKMGNIDVLTGKNGEIRKHCNFVNQNSAQLGITRESSEEGIVSSI* 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g05263 198 Gene3D - 157 177 - -
Rops2g05263 198 PANTHER PEROXIDASE 72-RELATED 131 176 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops2g05263 198 ProSiteProfiles Plant heme peroxidase family profile. 45 134 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops2g05263 198 SUPERFAMILY Heme-dependent peroxidases 40 177 IPR010255 GO:0004601|GO:0006979|GO:0020037
Rops2g05263 198 Gene3D Peroxidase, domain 2 101 131 - -
Rops2g05263 198 Gene3D - 45 100 - -
Rops2g05263 198 ProSiteProfiles Plant heme peroxidase family profile. 135 177 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops2g05263 198 Gene3D Peroxidase, domain 2 132 156 - -
Rops2g05263 198 PRINTS Plant peroxidase signature 123 135 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops2g05263 198 PRINTS Plant peroxidase signature 75 90 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops2g05263 198 PRINTS Plant peroxidase signature 56 66 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops2g05263 198 Pfam Peroxidase 41 129 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops2g05263 198 PRINTS Haem peroxidase superfamily signature 75 87 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops2g05263 198 PRINTS Haem peroxidase superfamily signature 57 74 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g05263 Rops-Chr2 93893320 93897007 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g05263 129 181 Peroxidase AT5G06730 54.717 9.57e-12 61.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g05263 K00430 - gmx:112997600 133.265