Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g05260 ATGGCAGTAACCTTCAAAGGGTGTTACTCCGTGAGGCCCATGGAGCCAACATGGAGCGGTCGTTTACCTCTATCTGAAGGGGATCAAATAGGCATCATAACTCACGTGCCCACAATCTACTTCTACCGTCCCTCTCAAAACTGGAACTACACCACCATTGTCAGCACCTTGAAAGAGTCCTTAAGCAGAGTTCTTGTGCCGTTTTATCCACTCGCCGGTCGTTTACATTGGATAGGCAACGGTCGTTTTGAGCTGGATTGCAATGCCATGGGTGTTCACTTCATTGAAGCTGAGTCCTTATTAACTTTAGATGATCTCGGTGACTTTTCACCCTCTTCCCACTACCATTACCTTGTCCCAAGTGTAGACTATACCCTCCCACTTCATGGGTTGCCCTTGGTTCTGGTTCAGTTCACGATGTTCAGGTGTGGCGGCATCAGCATCTGTTTCAAAAACTCTCATGCGGTTGCAGATGGACCAAGTGCCTTACACTTCGTTTCTGAGTGGGCAAGGCTTGCACGGGGTGAGCCCTTGCAAACGATGCCGTTTCATGATCGAAAAGTGTTCCGAGCAGGAGAAGCTCCTCTACCGTGTAACGGTGGTTCATGGGAGTTCCATCCCCTTCCATTGTTGCTTGGCCAAACAGATAATATGGAGGAAAGGAAGAAGAAAACCACTGTGGCTATCATCAAACTGAGCAAAACCCAAGTTGAGAAGTTGAGAAAAACGGCAAATGAACGTCACAATGGGCGTGGTTATACACGGTATGAGACTGTAACTGGGCACATATGGAGAAGTGCATGCAAGGCAAGAGGGCACAAACAGGAACAACCAACCGGTCTGGCTGTTTGTGTTGACTCGAGGGATCGCATGCAGCCTCCGTTGCCAAAAGGGTATTTTGGGAATGCCATTTTGGATGTGTTTGCTACTAGTCTTGTGGGTGATTTGATGTCAAAGCCATTGGGGTATGCATCAAGTAGAATAAGGGAGGCAATTGAGAAGGTAACTGATGAGTACGTGAGGTCAGGGATTGAGTTCTTTAAGAAGCAGGAGGATTTGACAAAGTTTCAAGATCTTCACGCAATAGGGAATGAAGGCAAGTGGCTTTTCTGCTATGAGAACCCAAATCTTGGGGTGGTTAGTTGGTTGACGTTACCGGTCTATGGGCTTGATTTTGGGTGGGGAAAGGAGGTTTACATGGGTCCGGCGACAACAGACTTGTTTGATGGAGATTCTTTTCTTCTTCCCGGTCCAGATGGGGATGGATCTCTGCTCGTTGCTATTTGTTTGGAAGAGGTTCATATGGATGCGTTTAAGAAACATATTTATGAAGACATTATGTAA 1344 0.4688 MAVTFKGCYSVRPMEPTWSGRLPLSEGDQIGIITHVPTIYFYRPSQNWNYTTIVSTLKESLSRVLVPFYPLAGRLHWIGNGRFELDCNAMGVHFIEAESLLTLDDLGDFSPSSHYHYLVPSVDYTLPLHGLPLVLVQFTMFRCGGISICFKNSHAVADGPSALHFVSEWARLARGEPLQTMPFHDRKVFRAGEAPLPCNGGSWEFHPLPLLLGQTDNMEERKKKTTVAIIKLSKTQVEKLRKTANERHNGRGYTRYETVTGHIWRSACKARGHKQEQPTGLAVCVDSRDRMQPPLPKGYFGNAILDVFATSLVGDLMSKPLGYASSRIREAIEKVTDEYVRSGIEFFKKQEDLTKFQDLHAIGNEGKWLFCYENPNLGVVSWLTLPVYGLDFGWGKEVYMGPATTDLFDGDSFLLPGPDGDGSLLVAICLEEVHMDAFKKHIYEDIM* 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g05260 447 Gene3D - 213 445 IPR023213 -
Rops2g05260 447 FunFam Tryptamine hydroxycinnamoyl transferase 213 443 - -
Rops2g05260 447 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 11 443 - -
Rops2g05260 447 Pfam Transferase family 1 444 - -
Rops2g05260 447 Gene3D - 1 204 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g05260 Rops-Chr2 93848709 93850052 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g05260 1 444 Monolignol Biosynthesis Gene Families AT5G48930 39.414 1.29e-114 341
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g05260 K13065 - gmx:100777007 657.521