Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g05259 ATGTCAAAGCCTTTGGGATATTCGTCGAGTAGAATAAGGGAGGCGATTGAGAAGGTGACTGATGAGTATGTGAGGTCAGGGATTGAGTTCTTTAAGAAGCAGGAGGATTTGACTAAGTATCAAGATCTTCATGTAAAAGGGAGGTGCAAGTGGCCTTACTTTGAGAATCCAAATCTTTGGGCTATTAGTTGGTTGATGTTACCGATCTATGGTTTTGATTTTGGGTGGGGGAAGGAAGTTTACATGGGTCCGGCGACAGCAGACTTGTTTGATGGAGATTTTTTTCTTCTTCCCGGTCCAGATAGCGATGAGTCTTTGCTTGTTGCTATTTGTCTCCAAGAGGTTCACATGGATGCCTTTAAGACGCATTTTTATGAAGACATCATGTAA 390 0.4231 MSKPLGYSSSRIREAIEKVTDEYVRSGIEFFKKQEDLTKYQDLHVKGRCKWPYFENPNLWAISWLMLPIYGFDFGWGKEVYMGPATADLFDGDFFLLPGPDSDESLLVAICLQEVHMDAFKTHFYEDIM* 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g05259 129 Gene3D - 1 127 IPR023213 -
Rops2g05259 129 Pfam Transferase family 2 126 - -
Rops2g05259 129 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 6 124 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g05259 Rops-Chr2 93843072 93843461 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g05259 1 126 Monolignol Biosynthesis Gene Families AT5G48930 38.095 4.34e-23 90.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g05259 K13065 - gmx:100777007 188.734