Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g05257 ATGGCAGTAACCTTCAAAGGGTGTTACTCCGTGAGGCCCATGGAGCCAACATGGAGCGGTCGTTTACCTTTATCTGAATGGGATCAAATAGGCATCATAACTCACTGGCCCACAATCTACTTCTATCGTCCCTCACTAAACTGGCATTACACCACCATTGTTACCACGTTGAAAGAGTCCTTAAGTAGAGTCCTTGTGCCGTTTTATTTACTAGTCGGTCGTTTTCAGTGGATAGACAATGGTCGTTTTGAGCTGGATTGCAATGCCATGGGTGTTAACTTCATTTAA 288 0.4444 MAVTFKGCYSVRPMEPTWSGRLPLSEWDQIGIITHWPTIYFYRPSLNWHYTTIVTTLKESLSRVLVPFYLLVGRFQWIDNGRFELDCNAMGVNFI* 96
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g05257 95 Gene3D - 1 95 IPR023213 -
Rops2g05257 95 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 11 95 - -
Rops2g05257 95 Pfam Transferase family 1 95 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g05257 Rops-Chr2 93842130 93842417 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g05257 1 95 Monolignol Biosynthesis Gene Families AT5G48930 37.895 3.06e-14 64.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g05257 K13065 - gmx:100777007 135.576
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g05257 2 93842130 93842417 Rops2g05257 2 93842130 93842417 ECH