Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g05256 ATGTCAGTAACCTTCAAAGGCTGTTACTCCGTGAGGCCTATGGAGCCAACATGGAGCGGTCGCTTACCTTTATCTGAATGGGATCAAATAGGCACCATAACTCACGTGCCCACAATCTACTTCTACCGCCCCTCACAAAACTGGGACTACACCACCATTGCCAGTACCTTGAATGAGTCCTTAAGCAGAGTCCTTGTGCCGTTTTATCCACTCGCCGGTCGTTTATATTGGATAGGCAATGGTCGTTTTGAGCTGGAGTGCAATGCCATGGGTGTTCACATCATTGAAGCTGAGTCCTCATTAACTTTAGATGATCTTGGTAACTTTTCACCCTCTTCTCACTACGATTACCTTATCCCAAGTGTAGACTATACCCTCCCACTTCATGAGTTGCCCTTAGTTCTGGTTCAGTTCACGATGTTCAGGTGTGGCGGCATCAGCATCAGCTTCAAAGTCTCTCATGCGGTTGCAGATGGACCAAGTGCCTTACACTTCATTTCTGAGTGGGCAAGGCTTGCAAGAGGTGAGCCCTTGCAAACGACGCCGTTTCTTGAACCGAAAGTGTTGCGTGCTGGAGAAGCTCCTCTACCGTGTAACGGTGGTTCATGGGAGTTCCACCCCCCTCCACTGTTGCTTGGCCAAACAGATAATATGGAGGAAAGGAAGAAGAAAACCACTGTGGCTATCATCAAACTGAGCAAAACCCAAGTTGAGTTGTTGAGAAAAACGGCAAATGAACGTCACAATGGGCGTGGTTATACACGGTATGAGACTGTAACTGGGCACATATGGAGAAGTGCATGCAAGGCAAGAGGGCACAAACAGGAACAACCAACCGGTCTGGCTGTTTGTGTTGACTCAAGGTGTCGCATGCAGCCTCCGTTGCCTAAAGGGTATTTTGGGAATGCCACTTTGGACGTGGTTGCTACTAGTCTTGCGGGTGATTTGATGTCAAAGCCATTGGGGTATGCAGCGAGTAGAATAAGGGAGGCAATTGAGAAGGTGACAGATGAGTACGTGAGGTCAGGGATTGAGTTCTTTAAGAAGCAGGAGGATTTGACAAAGTTTCAAGATCTTCATGCAATAGGGAGTGACAAGGGACCTTTCTATGGGAACCCAAATGTTGGGGTGGTTAGTTGGTTGACGTTACCGATTGATGGGCTTGATTTTGGGTGGGGGAAGGAGGTTTACATGGGTCCGGGAGCACACGACTTTGATGGAGATTCTTTGCTTCTTCCAGGTCCAGATGGGGATGGATCTTTGCTCCTTGCTATTTGTCTGCAAGAGGTTCATATGGATGCTTTTAAGAAACATTTCTATGAAGACATTATGTAA 1335 0.4742 MSVTFKGCYSVRPMEPTWSGRLPLSEWDQIGTITHVPTIYFYRPSQNWDYTTIASTLNESLSRVLVPFYPLAGRLYWIGNGRFELECNAMGVHIIEAESSLTLDDLGNFSPSSHYDYLIPSVDYTLPLHELPLVLVQFTMFRCGGISISFKVSHAVADGPSALHFISEWARLARGEPLQTTPFLEPKVLRAGEAPLPCNGGSWEFHPPPLLLGQTDNMEERKKKTTVAIIKLSKTQVELLRKTANERHNGRGYTRYETVTGHIWRSACKARGHKQEQPTGLAVCVDSRCRMQPPLPKGYFGNATLDVVATSLAGDLMSKPLGYAASRIREAIEKVTDEYVRSGIEFFKKQEDLTKFQDLHAIGSDKGPFYGNPNVGVVSWLTLPIDGLDFGWGKEVYMGPGAHDFDGDSLLLPGPDGDGSLLLAICLQEVHMDAFKKHFYEDIM* 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g05256 444 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 11 440 - -
Rops2g05256 444 Gene3D - 1 204 IPR023213 -
Rops2g05256 444 Pfam Transferase family 1 441 - -
Rops2g05256 444 FunFam Tryptamine hydroxycinnamoyl transferase 213 440 - -
Rops2g05256 444 Gene3D - 214 442 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g05256 Rops-Chr2 93822306 93823640 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g05256 1 441 Monolignol Biosynthesis Gene Families AT5G48930 38.914 7.68e-112 334
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g05256 K13065 - gmx:100777007 695.656