Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g05246 ATGAGATTGCTAGAGTTTGGATGTGTGTTGATTGTTCTATCTGTTCTTCTGGTTTCTGGGAAAGCTGAGATTTACATAGTAACTGTTGAAGGTGAGCCTATTATAAGTTATGCTGGAGGTATTGATGGGTTTGAAGCTACTGCTGTAGAATCTGATGAGAAGATTGATACCACAAGTGAATTGGTTACTTCTTATGCTCGTCATCTTGAGAAAAAACATGATATGCTTCTGGGGATGCTGTTTGAGCATGGGACATACAAGAAACTCTATAGCTATCGGCATCTTATAAATGGGTTTGCTGTTCATATTTCCCCAGAACAGGCAGAAACTTTAAGACGTGCTCCTGGAGTGAAATTTGTTGAGAGGGACTGGAAAGTGAAAAGACTTACAACACATACCCCACAATTTTTAGGGCTTCCAACTGGGGTATGGCCAACAGGAGGTGGCTTTGATCGAGCTGGAGAAGACATTGTGATTGGATTTGTGGACTCAGGGATCTATCCTCACCACCCAAGCTTTGCAACTCATAATACTGAACCATATGAGCCAGTTCCAAAGTATAGAGGAAAATGTGAAGTTGATCCGGATACTAAAAAGAGTTACTGTAATGGGAAGATTGTTGGAGCACAACACTTTGCCCAAGCTGCAATAGCTGCTGGGGCATTTAACCCTTCAATTGATTTTGCATCTCCTCTAGATGGTGATGGACACGGAAGTCATACTGCCTCTATTGCAGCTGGAAATAATGGAATTCCTGTGAGAATGCATGGCCATGAATTTGGGAAAGCAAGTGGGATGGCTCCTCGTGCCAGGATTGCAGTGTACAAGGCACTCTATAGACTGTTTGGAGGGTTTGTTGCAGATGTAGTTGCTGCAATCGATCAGGCTGTATATGATGGAGTGGATATACTCAGCCTTTCAGTTGGACCCAACGGTCCTCCAGCAGCCACCAAAATTACGTTTTTGAACCCTTTTGATGCTACACTTCTTGGAGCTGTGAAGGCTGGTGTATTTGTCGCACAGGCTGCTGGAAATGGTGGTCCTTTTCCAAAGACAATGGTTTCATATAGTCCATGGATAGCATCTGTAGCAGCTGCAATTGATGATCGTCGATATAAAAACCATTTGATTCTTGGAAATGGAAAGATCTTAGCTGGAATTGGGTTATCACCTTCTACACATTTAAACCAAACATACACATTGGTTGCTGCAAATGATGTGCTGCTAGATTCTTCAGTTATGAAGTACAGCCCCACGGATTGCCAGAAACCAGAAGTTTTGAACAAGAACTTGATAGAGGGCAATATTCTTCTCTGTGGATATTCTTTCAACTTTGTTGTTGGTACTGCATCAATCAAGAAAGTCTCAGAAACAGCAAAGGCTCTTGGTGCAGTTGGATTTGTTCTGTGTGTCGAAAACGTTTCCCCTGGAACAAAATTTGATCCTGTCCCTGTTGGCCTTCCTGGGATTCTTATCATAGATGCTAGCAATTCAAAGGAACTAGTAGATTATTATAACATCTCTACACCTAGAGACTGGACTGGACGGGTGAAGAGTTTCAAAGGTGCAGGTAAAATTGGCGATGGTTTGATGCCTATTCTACATAAATCTGCACCACAGGTGGCATTGTTCTCTGCTAGAGGGCCAAATATAAAGGACTTCAGCTTCCAAGAGGCAGATCTTCTCAAACCAGATATATTAGCTCCTGGTTCATTGATTTGGGGTGCATGGTGTCCAAATGGAACTGACGAACCAAATTATGTTGGAGAGGGATTTGCCATGATATCTGGAACTAGCATGGCTGCACCGCATATAGCTGGAATTGCTGCTCTTATAAAGCAGAAGCATCCACATTGGAGCCCTGCCGCCATCAAATCAGCCTTGATGACTACATCAACAACTCTAGACAGAGCAGGGAATCCACTTCTAGCCCAGCAAACTTCTGAAACAGAAGCTATGAAGCTGGTCAAAGCTACTCCATTTGATTATGGGAGTGGACATGTTGATCCAACAGCTGCTTTGGACCCTGGGCTCATCTTTGATGCAGGATATGAGGATTATCTAGGCTTCTTGTGCACAACGCCTGGCATTGATATTCATGAGATAAAGAACTTCACTCACGCCCCATGTAACAATACCATGGGAAAACCATCAAATCTGAACTCTCCGTCTATCACAATTTCCCATCTTGTGGGAACTCAAGTTGTCAAACGCACTGTCACAAATGTTGCTGAGGAAGAAACCTATGTGATAACAGCCAGAATGGAACCAGCTGTTGCCATTGAAGTCAACCCTCCTGCAATGACTATCAAAGCAGGTGCATCACGCCAGTTTTCTGTGACACTTACAACTCGCTCAGTGAGAGGAACCTATAGTTTTGGAGAGGTTTTAATGAAAGGGAGCAGAGGGCATAAGACTCTGCTTCTACTTCTTCAACTTTCAGAGATGGTAACCGAAGGGAAGAAGCAATCCAAAATTTTTCTGACGAAGCCCTTCTCATTGGAAGGTGACTCACATTTGGACCCAACTTATAAAGCCCCTAATCTCCTAAATCGCTTGTTAAGTTTACTCAAAAATATACGGCCAGGATCTGATTTAACACACTTCCAGCTGCCACCTCTGTTTAATTTCCCAAAATCTCAACTTCAGTGCTATGGTGAATCAGTGTACTGCACAACTTCAAACTTGCTGAGCAGATGCAACAGTGGGGAGAGTCCAGTGGAGAGGTTCACATCAGTGGTAGCATGGAGCATATCCACCACACGCCCTACCTCTTTTGGGGTTGCTCCCTATACTCCCACTCTTGGAGAGACCCACCATGTTTCCAATGCCACCCTTAACGTCCTACTTGAGCAAGTTTCAATCGACCCTCCAGTATCTGCCCTCCATGCAACTGATGAGAAGGAAAACATTGAAATGATCTGGTGTCAACAACCTGTTCCCAAGTTTCGTGGTACATCTATTGAAGCTAAAGTGCATGGCAAACGGCAGTTGAAGCTCCTAAATCATGGGGAAACATATGAAATGAATAGTCCTCACCTTTTAATTAGAATTCTTCCTGTTCCTGGAGTTGAATGGGTTGGCAATGTTAATATAAGGTGCCTTGAGACAGGCCTGGTGGCTGAGTTATCCTACAGATCAAGCCATTCTTTTCTAGGACTTGGGGGAAATCGTAAAGTGATCAAAGGGAAGATCCTTGATTCATCAGTAGCCAAAGTTCTATATGAAGTTGATGGTCAATGGGATAGGACTGTGAAAGTGAAGGATACAAATAGTGGGAAAGTCAGAGTGATATATGATGCAAAAGAAGTCATTTCAGGGCTCAAAGCTCCTATTGTCAAGGATGAGGAGAGTGTGTGGCCAACTGAATCAGCCCTTGTTTGGAGTGAGTTGAGCCAAGCCATCATGAACAAAGACTGGGAGAAAGCAAGAGAAGAAAAGCAAAGTGTGGAGGAAAGACAGAGGAAGATGTTGAGAGAAAGAGACACATCTTGGATTCCTAAGAATTTCATGGTGTCTTACAGTAAAGAAGGTGGGTGGGAGTGTGATTGTTCACCCATTCATAAATGGGTCCCTGCTGCCCCCATCATATGCCAGTAA 3600 0.435 MRLLEFGCVLIVLSVLLVSGKAEIYIVTVEGEPIISYAGGIDGFEATAVESDEKIDTTSELVTSYARHLEKKHDMLLGMLFEHGTYKKLYSYRHLINGFAVHISPEQAETLRRAPGVKFVERDWKVKRLTTHTPQFLGLPTGVWPTGGGFDRAGEDIVIGFVDSGIYPHHPSFATHNTEPYEPVPKYRGKCEVDPDTKKSYCNGKIVGAQHFAQAAIAAGAFNPSIDFASPLDGDGHGSHTASIAAGNNGIPVRMHGHEFGKASGMAPRARIAVYKALYRLFGGFVADVVAAIDQAVYDGVDILSLSVGPNGPPAATKITFLNPFDATLLGAVKAGVFVAQAAGNGGPFPKTMVSYSPWIASVAAAIDDRRYKNHLILGNGKILAGIGLSPSTHLNQTYTLVAANDVLLDSSVMKYSPTDCQKPEVLNKNLIEGNILLCGYSFNFVVGTASIKKVSETAKALGAVGFVLCVENVSPGTKFDPVPVGLPGILIIDASNSKELVDYYNISTPRDWTGRVKSFKGAGKIGDGLMPILHKSAPQVALFSARGPNIKDFSFQEADLLKPDILAPGSLIWGAWCPNGTDEPNYVGEGFAMISGTSMAAPHIAGIAALIKQKHPHWSPAAIKSALMTTSTTLDRAGNPLLAQQTSETEAMKLVKATPFDYGSGHVDPTAALDPGLIFDAGYEDYLGFLCTTPGIDIHEIKNFTHAPCNNTMGKPSNLNSPSITISHLVGTQVVKRTVTNVAEEETYVITARMEPAVAIEVNPPAMTIKAGASRQFSVTLTTRSVRGTYSFGEVLMKGSRGHKTLLLLLQLSEMVTEGKKQSKIFLTKPFSLEGDSHLDPTYKAPNLLNRLLSLLKNIRPGSDLTHFQLPPLFNFPKSQLQCYGESVYCTTSNLLSRCNSGESPVERFTSVVAWSISTTRPTSFGVAPYTPTLGETHHVSNATLNVLLEQVSIDPPVSALHATDEKENIEMIWCQQPVPKFRGTSIEAKVHGKRQLKLLNHGETYEMNSPHLLIRILPVPGVEWVGNVNIRCLETGLVAELSYRSSHSFLGLGGNRKVIKGKILDSSVAKVLYEVDGQWDRTVKVKDTNSGKVRVIYDAKEVISGLKAPIVKDEESVWPTESALVWSELSQAIMNKDWEKAREEKQSVEERQRKMLRERDTSWIPKNFMVSYSKEGGWECDCSPIHKWVPAAPIICQ* 1200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g05246 1199 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 18 128 IPR037045 -
Rops2g05246 1199 Pfam Subtilase family 154 638 IPR000209 GO:0006508|GO:0008236
Rops2g05246 1199 ProSiteProfiles Serine proteases, subtilase domain profile. 123 674 - -
Rops2g05246 1199 Gene3D - 691 806 - -
Rops2g05246 1199 SUPERFAMILY Protease propeptides/inhibitors 86 126 - -
Rops2g05246 1199 Gene3D - 369 534 - -
Rops2g05246 1199 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 83 821 IPR045051 -
Rops2g05246 1199 CDD PA_subtilisin_like 376 514 - -
Rops2g05246 1199 Gene3D Peptidase S8/S53 domain 156 687 IPR036852 GO:0004252|GO:0006508
Rops2g05246 1199 CDD Peptidases_S8_3 130 633 IPR034197 -
Rops2g05246 1199 FunFam Subtilisin-like protease SBT1.5 156 377 - -
Rops2g05246 1199 Pfam Oxysterol-binding protein 854 1173 IPR000648 GO:0008289
Rops2g05246 1199 ProSitePatterns Serine proteases, subtilase family, serine active site. 597 607 IPR023828 -
Rops2g05246 1199 SUPERFAMILY Oxysterol-binding protein-like 850 1182 IPR037239 -
Rops2g05246 1199 PRINTS Subtilisin serine protease family (S8) signature 233 246 IPR015500 -
Rops2g05246 1199 PRINTS Subtilisin serine protease family (S8) signature 596 612 IPR015500 -
Rops2g05246 1199 PRINTS Subtilisin serine protease family (S8) signature 154 173 IPR015500 -
Rops2g05246 1199 Pfam Peptidase inhibitor I9 25 127 IPR010259 -
Rops2g05246 1199 Gene3D - 1117 1164 - -
Rops2g05246 1199 Pfam Fibronectin type-III domain 719 799 IPR041469 -
Rops2g05246 1199 SUPERFAMILY Subtilisin-like 129 678 IPR036852 GO:0004252|GO:0006508
Rops2g05246 1199 ProSitePatterns Serine proteases, subtilase family, aspartic acid active site. 159 170 IPR023827 -
Rops2g05246 1199 Gene3D - 932 1110 - -
Rops2g05246 1199 Coils Coil 1140 1160 - -
Rops2g05246 1199 FunFam Oxysterol-binding protein-related protein 4C 934 1112 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g05246 Rops-Chr2 93576217 93590462 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g05246 4 815 Subtilisin-like Serine Gene Family AT4G30020 80.221 0.0 1352
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g05246 - - gmx:100787619 1489.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g05246 2 93576217 93590462 Rops11g01721 11 27145082 27151239 PCT