Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g05222 ATGGAAGAGCAGATGGCTATACAAGAAGCTGCTTCTGCAGGGTTGAAGAGTATGGAGCATCTGATCCGTGTGCTTTCTTCTTCTTCTGCTGCTGCTGCTGCTGCTGCTGCTGCGTCGTCTACACAGAGCAATCACCGACTCAATTTGAACCACCTTGACTGCACCGAAATCACCGACTTTACTGTCTCTAAGTTCAAGCAAGTCATCAATTTGTTGAATCGTACTGGTCACGCTCGATTTCGTCGCGCACCTTCTCATCCCTCTCCCTCTGTTCCTTCTCAACCTTTCTCTGATAAATTTAACCACCATCAACCCCAGTCGTTGACTCTTGATTTTGCAAAGCCTCTTCCTGTGAAGTCAAATCCAAATCCAAATCCCAATCCCAATCCCAAACCATCTACCGATTTATCGGTTTCTCAATACTCCAACACCAAGTCCAAGGACACCTATAGCATCTCCAACACCACCTCTTCTTTCATGTCATCCATCACCGGAGACGGCAGCGTTTCCGACGGCAAGATAGGCCCCGCCATCCTTGCCGCTGGAAAACCCCCCCTCTCCTCATCTCACCGGAAAAGGTGTCACGACGCTACCCTTTCCGGAAAAGTCTCTTCCTCCGGCCAGTGTCACTGCTCTAAAAGAAGGAAATCCCGTGTGAAACGAATGGTTCGAGTTCCCGCGATAAGTTCGAAGATTGCTGATATCCCTGCCGATGAATACTCATGGAGGAAATATGGACAAAAACCCATCAAGGGATCACCTTACCCACGTGGGTACTACAAGTGCAGTAGCGTGAGAGGGTGTCCAGCGAGGAAACACGTGGAGCGAGCCCAAGACGATCCCAACATGCTCATCGTTACCTACGAGGGAGAGCACCGTCACTCGCAAACCGCCGGAGCCGGTGAAGGTGCCGGTTTCGCCTCTCAGCATGTTTAA 936 0.5053 MEEQMAIQEAASAGLKSMEHLIRVLSSSSAAAAAAAAASSTQSNHRLNLNHLDCTEITDFTVSKFKQVINLLNRTGHARFRRAPSHPSPSVPSQPFSDKFNHHQPQSLTLDFAKPLPVKSNPNPNPNPNPKPSTDLSVSQYSNTKSKDTYSISNTTSSFMSSITGDGSVSDGKIGPAILAAGKPPLSSSHRKRCHDATLSGKVSSSGQCHCSKRRKSRVKRMVRVPAISSKIADIPADEYSWRKYGQKPIKGSPYPRGYYKCSSVRGCPARKHVERAQDDPNMLIVTYEGEHRHSQTAGAGEGAGFASQHV* 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g05222 311 MobiDBLite consensus disorder prediction 80 157 - -
Rops2g05222 311 Gene3D WRKY domain 206 297 IPR036576 GO:0003700|GO:0006355|GO:0043565
Rops2g05222 311 SUPERFAMILY WRKY DNA-binding domain 234 296 IPR036576 GO:0003700|GO:0006355|GO:0043565
Rops2g05222 311 MobiDBLite consensus disorder prediction 132 157 - -
Rops2g05222 311 SMART WRKY_cls 236 296 IPR003657 GO:0003700|GO:0006355|GO:0043565
Rops2g05222 311 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 5 298 IPR044810 GO:0003700
Rops2g05222 311 MobiDBLite consensus disorder prediction 92 108 - -
Rops2g05222 311 ProSiteProfiles WRKY domain profile. 231 297 IPR003657 GO:0003700|GO:0006355|GO:0043565
Rops2g05222 311 Pfam Plant zinc cluster domain 191 234 IPR018872 -
Rops2g05222 311 Pfam WRKY DNA -binding domain 238 294 IPR003657 GO:0003700|GO:0006355|GO:0043565
Rops2g05222 311 FunFam WRKY transcription factor 65 220 297 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g05222 Rops-Chr2 93156876 93158433 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g05222 1 297 WRKY Transcription Factor Family AT2G24570 52.147 1.57e-96 286
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Rops2g05222 WRKY 2.4e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g05222 - - gmx:732589 434.106
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g05222 2 93156876 93158433 Rops2g05222 2 93156876 93158433 ECH
Rops1g01810 1 37319177 37321453 Rops2g05222 2 93156876 93158433 PCT
Rops2g05222 2 93156876 93158433 Rops11g01753 11 28103800 28105207 PCT